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Iron in PDB 7lad: Clobetasol Propionate Bound to CYP3A5

Enzymatic activity of Clobetasol Propionate Bound to CYP3A5

All present enzymatic activity of Clobetasol Propionate Bound to CYP3A5:
1.14.14.1;

Protein crystallography data

The structure of Clobetasol Propionate Bound to CYP3A5, PDB code: 7lad was solved by C.D.Buchman, D.Miller, J.Wang, S.Jayaraman, T.Chen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.40 / 2.65
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 75.404, 93.912, 138.716, 90, 90, 90
R / Rfree (%) 25 / 27.8

Other elements in 7lad:

The structure of Clobetasol Propionate Bound to CYP3A5 also contains other interesting chemical elements:

Fluorine (F) 1 atom
Chlorine (Cl) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Clobetasol Propionate Bound to CYP3A5 (pdb code 7lad). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Clobetasol Propionate Bound to CYP3A5, PDB code: 7lad:

Iron binding site 1 out of 1 in 7lad

Go back to Iron Binding Sites List in 7lad
Iron binding site 1 out of 1 in the Clobetasol Propionate Bound to CYP3A5


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Clobetasol Propionate Bound to CYP3A5 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe601

b:47.7
occ:1.00
FE A:HEM601 0.0 47.7 1.0
NC A:HEM601 1.9 34.7 1.0
NB A:HEM601 1.9 51.5 1.0
NA A:HEM601 1.9 31.1 1.0
ND A:HEM601 2.1 43.8 1.0
SG A:CYS441 2.3 58.0 1.0
C1C A:HEM601 2.9 40.5 1.0
C4B A:HEM601 2.9 34.7 1.0
C1B A:HEM601 3.0 32.2 1.0
C1A A:HEM601 3.0 41.1 1.0
C4C A:HEM601 3.0 39.9 1.0
C4A A:HEM601 3.0 37.7 1.0
C4D A:HEM601 3.1 44.5 1.0
C1D A:HEM601 3.1 45.2 1.0
CB A:CYS441 3.2 35.7 1.0
CHC A:HEM601 3.3 37.7 1.0
CHB A:HEM601 3.4 32.8 1.0
CHA A:HEM601 3.4 46.0 1.0
CHD A:HEM601 3.5 42.0 1.0
CA A:CYS441 4.0 42.5 1.0
O A:ALA305 4.1 45.7 1.0
C2C A:HEM601 4.2 43.0 1.0
C3C A:HEM601 4.2 46.6 1.0
C3B A:HEM601 4.2 29.0 1.0
C2B A:HEM601 4.2 32.6 1.0
C2A A:HEM601 4.2 40.8 1.0
C3A A:HEM601 4.2 42.3 1.0
C26 A:XRD602 4.3 56.7 1.0
C2D A:HEM601 4.4 49.0 1.0
C3D A:HEM601 4.4 47.0 1.0
CB A:ALA305 4.5 51.6 1.0
CL27 A:XRD602 4.7 59.2 1.0
C A:ALA305 4.9 56.3 1.0
C A:CYS441 4.9 50.6 1.0

Reference:

J.Wang, C.D.Buchman, J.Seetharaman, D.J.Miller, A.D.Huber, J.Wu, S.C.Chai, E.Garcia-Maldonado, W.C.Wright, J.Chenge, T.Chen. Unraveling the Structural Basis of Selective Inhibition of Human Cytochrome P450 3A5. J.Am.Chem.Soc. 2021.
ISSN: ESSN 1520-5126
PubMed: 34648292
DOI: 10.1021/JACS.1C07066
Page generated: Thu Aug 8 06:55:37 2024

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