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Iron in PDB 7lrl: Co-Complex CYP46A1 with 7742 (Soticlestat/Tak-935))

Enzymatic activity of Co-Complex CYP46A1 with 7742 (Soticlestat/Tak-935))

All present enzymatic activity of Co-Complex CYP46A1 with 7742 (Soticlestat/Tak-935)):
1.14.14.25;

Protein crystallography data

The structure of Co-Complex CYP46A1 with 7742 (Soticlestat/Tak-935)), PDB code: 7lrl was solved by W.Lane, J.Yano, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.27 / 2.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 58.241, 63.532, 123.749, 90, 90, 90
R / Rfree (%) 21.9 / 23.7

Iron Binding Sites:

The binding sites of Iron atom in the Co-Complex CYP46A1 with 7742 (Soticlestat/Tak-935)) (pdb code 7lrl). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Co-Complex CYP46A1 with 7742 (Soticlestat/Tak-935)), PDB code: 7lrl:

Iron binding site 1 out of 1 in 7lrl

Go back to Iron Binding Sites List in 7lrl
Iron binding site 1 out of 1 in the Co-Complex CYP46A1 with 7742 (Soticlestat/Tak-935))


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Co-Complex CYP46A1 with 7742 (Soticlestat/Tak-935)) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe501

b:10.2
occ:1.00
FE A:HEM501 0.0 10.2 1.0
NB A:HEM501 2.0 9.4 1.0
NC A:HEM501 2.0 11.1 1.0
NA A:HEM501 2.0 11.1 1.0
ND A:HEM501 2.1 9.4 1.0
N26 A:YBS502 2.1 8.4 1.0
SG A:CYS437 2.3 9.4 1.0
C27 A:YBS502 3.0 10.4 1.0
C25 A:YBS502 3.0 10.9 1.0
C4B A:HEM501 3.0 11.0 1.0
C1B A:HEM501 3.0 10.7 1.0
C1C A:HEM501 3.0 11.0 1.0
C4C A:HEM501 3.1 10.2 1.0
C4A A:HEM501 3.1 9.8 1.0
C1A A:HEM501 3.1 10.8 1.0
C1D A:HEM501 3.1 8.8 1.0
C4D A:HEM501 3.1 9.8 1.0
CB A:CYS437 3.4 10.5 1.0
CHB A:HEM501 3.4 10.7 1.0
CHC A:HEM501 3.4 11.4 1.0
CHD A:HEM501 3.4 9.7 1.0
CHA A:HEM501 3.4 8.7 1.0
CA A:CYS437 4.1 11.0 1.0
C2B A:HEM501 4.2 10.1 1.0
C3B A:HEM501 4.2 11.1 1.0
C2C A:HEM501 4.3 11.5 1.0
C3C A:HEM501 4.3 11.1 1.0
C2A A:HEM501 4.3 9.0 1.0
C3A A:HEM501 4.3 9.7 1.0
C3D A:HEM501 4.3 7.9 1.0
C2D A:HEM501 4.3 8.8 1.0
C28 A:YBS502 4.3 10.8 1.0
C24 A:YBS502 4.3 10.4 1.0
C23 A:YBS502 4.9 10.7 1.0
C A:CYS437 4.9 11.2 1.0
N A:GLY439 4.9 12.3 1.0

Reference:

T.Koike, M.Yoshikawa, H.K.Ando, W.Farnaby, T.Nishi, E.Watanabe, J.Yano, M.Miyamoto, S.Kondo, T.Ishii, T.Kuroita. Discovery of Soticlestat, A Potent and Selective Inhibitor For Cholesterol 24-Hydroxylase (CH24H). J.Med.Chem. 2021.
ISSN: ISSN 0022-2623
PubMed: 34387987
DOI: 10.1021/ACS.JMEDCHEM.1C00864
Page generated: Wed Aug 6 23:13:09 2025

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