Iron in PDB 7p8w: Human Erythrocyte Catalase Cryoem

All present enzymatic activity of Human Erythrocyte Catalase Cryoem:
1.11.1.6;

The binding sites of Iron atom in the Human Erythrocyte Catalase Cryoem (pdb code 7p8w). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the Human Erythrocyte Catalase Cryoem, PDB code: 7p8w:
Jump to Iron binding site number: 1; 2; 3; 4;

Iron binding site 1 out of 4 in the Human Erythrocyte Catalase Cryoem


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Human Erythrocyte Catalase Cryoem within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe602 b:22.7 occ:1.00 FE A:HEM602 0.0 22.7 1.0 OH A:TYR358 1.9 19.3 1.0 ND A:HEM602 1.9 23.4 1.0 NA A:HEM602 2.0 23.6 1.0 NB A:HEM602 2.1 24.3 1.0 NC A:HEM602 2.1 25.3 1.0 C4D A:HEM602 2.9 23.1 1.0 C1D A:HEM602 2.9 23.1 1.0 C1A A:HEM602 3.0 21.9 1.0 CZ A:TYR358 3.0 21.5 1.0 C4B A:HEM602 3.0 24.9 1.0 C4A A:HEM602 3.0 25.0 1.0 C4C A:HEM602 3.1 25.5 1.0 C1B A:HEM602 3.1 27.2 1.0 C1C A:HEM602 3.1 25.9 1.0 CHA A:HEM602 3.3 23.6 1.0 CHD A:HEM602 3.4 23.9 1.0 CHC A:HEM602 3.5 24.1 1.0 CHB A:HEM602 3.5 25.0 1.0 CE2 A:TYR358 3.7 22.3 1.0 CE1 A:TYR358 3.9 21.8 1.0 C2D A:HEM602 4.1 24.6 1.0 C3D A:HEM602 4.1 23.5 1.0 NE A:ARG354 4.2 23.9 1.0 C2A A:HEM602 4.2 22.8 1.0 C3A A:HEM602 4.2 25.7 1.0 NH2 A:ARG354 4.2 24.2 1.0 C3C A:HEM602 4.3 27.5 1.0 C2B A:HEM602 4.3 26.2 1.0 C2C A:HEM602 4.3 28.4 1.0 C3B A:HEM602 4.3 28.7 1.0 O A:HOH849 4.4 35.5 1.0 CZ A:PHE161 4.6 23.9 1.0 CG2 A:VAL74 4.6 24.2 1.0 CZ A:ARG354 4.6 24.4 1.0 CD2 A:HIS75 4.7 22.7 1.0 NE2 A:HIS75 4.8 22.2 1.0

Iron binding site 2 out of 4 in the Human Erythrocyte Catalase Cryoem


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Human Erythrocyte Catalase Cryoem within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe602 b:22.7 occ:1.00 FE B:HEM602 0.0 22.7 1.0 OH B:TYR358 1.9 19.3 1.0 ND B:HEM602 1.9 23.4 1.0 NA B:HEM602 2.0 23.6 1.0 NB B:HEM602 2.1 24.3 1.0 NC B:HEM602 2.1 25.3 1.0 C4D B:HEM602 2.9 23.1 1.0 C1D B:HEM602 2.9 23.1 1.0 C1A B:HEM602 3.0 21.9 1.0 CZ B:TYR358 3.0 21.5 1.0 C4B B:HEM602 3.0 24.9 1.0 C4A B:HEM602 3.0 25.0 1.0 C4C B:HEM602 3.1 25.5 1.0 C1B B:HEM602 3.1 27.2 1.0 C1C B:HEM602 3.1 25.9 1.0 CHA B:HEM602 3.3 23.6 1.0 CHD B:HEM602 3.4 23.9 1.0 CHC B:HEM602 3.5 24.1 1.0 CHB B:HEM602 3.5 25.0 1.0 CE2 B:TYR358 3.7 22.3 1.0 CE1 B:TYR358 3.9 21.8 1.0 C2D B:HEM602 4.1 24.6 1.0 C3D B:HEM602 4.1 23.5 1.0 NE B:ARG354 4.2 23.9 1.0 C2A B:HEM602 4.2 22.8 1.0 C3A B:HEM602 4.2 25.7 1.0 NH2 B:ARG354 4.2 24.2 1.0 C3C B:HEM602 4.3 27.5 1.0 C2B B:HEM602 4.3 26.2 1.0 C2C B:HEM602 4.3 28.4 1.0 C3B B:HEM602 4.3 28.7 1.0 O B:HOH850 4.4 35.5 1.0 CZ B:PHE161 4.6 23.9 1.0 CG2 B:VAL74 4.6 24.2 1.0 CZ B:ARG354 4.6 24.4 1.0 CD2 B:HIS75 4.7 22.7 1.0 NE2 B:HIS75 4.8 22.2 1.0

Iron binding site 3 out of 4 in the Human Erythrocyte Catalase Cryoem


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Human Erythrocyte Catalase Cryoem within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe602 b:22.7 occ:1.00 FE C:HEM602 0.0 22.7 1.0 OH C:TYR358 1.9 19.3 1.0 ND C:HEM602 1.9 23.4 1.0 NA C:HEM602 2.0 23.6 1.0 NB C:HEM602 2.1 24.3 1.0 NC C:HEM602 2.1 25.3 1.0 C4D C:HEM602 2.9 23.1 1.0 C1D C:HEM602 2.9 23.1 1.0 C1A C:HEM602 3.0 21.9 1.0 CZ C:TYR358 3.0 21.5 1.0 C4B C:HEM602 3.0 24.9 1.0 C4A C:HEM602 3.0 25.0 1.0 C4C C:HEM602 3.1 25.5 1.0 C1B C:HEM602 3.1 27.2 1.0 C1C C:HEM602 3.1 25.9 1.0 CHA C:HEM602 3.3 23.6 1.0 CHD C:HEM602 3.4 23.9 1.0 CHC C:HEM602 3.5 24.1 1.0 CHB C:HEM602 3.5 25.0 1.0 CE2 C:TYR358 3.7 22.4 1.0 CE1 C:TYR358 3.9 21.8 1.0 C2D C:HEM602 4.1 24.6 1.0 C3D C:HEM602 4.1 23.5 1.0 NE C:ARG354 4.2 23.9 1.0 C2A C:HEM602 4.2 22.8 1.0 C3A C:HEM602 4.2 25.7 1.0 NH2 C:ARG354 4.2 24.2 1.0 C3C C:HEM602 4.3 27.5 1.0 C2B C:HEM602 4.3 26.2 1.0 C2C C:HEM602 4.3 28.4 1.0 C3B C:HEM602 4.3 28.7 1.0 O C:HOH850 4.4 35.4 1.0 CZ C:PHE161 4.6 23.9 1.0 CG2 C:VAL74 4.6 24.2 1.0 CZ C:ARG354 4.6 24.4 1.0 CD2 C:HIS75 4.7 22.7 1.0 NE2 C:HIS75 4.8 22.2 1.0

Iron binding site 4 out of 4 in the Human Erythrocyte Catalase Cryoem


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Human Erythrocyte Catalase Cryoem within 5.0Å range: probe atom residue distance (Å) B Occ D:Fe602 b:22.7 occ:1.00 FE D:HEM602 0.0 22.7 1.0 OH D:TYR358 1.9 19.3 1.0 ND D:HEM602 1.9 23.4 1.0 NA D:HEM602 2.0 23.6 1.0 NB D:HEM602 2.1 24.3 1.0 NC D:HEM602 2.1 25.3 1.0 C4D D:HEM602 2.9 23.1 1.0 C1D D:HEM602 2.9 23.1 1.0 C1A D:HEM602 3.0 21.9 1.0 CZ D:TYR358 3.0 21.5 1.0 C4B D:HEM602 3.0 24.9 1.0 C4A D:HEM602 3.0 25.0 1.0 C4C D:HEM602 3.1 25.5 1.0 C1B D:HEM602 3.1 27.2 1.0 C1C D:HEM602 3.1 25.9 1.0 CHA D:HEM602 3.3 23.6 1.0 CHD D:HEM602 3.4 23.9 1.0 CHC D:HEM602 3.5 24.1 1.0 CHB D:HEM602 3.5 25.0 1.0 CE2 D:TYR358 3.7 22.4 1.0 CE1 D:TYR358 3.9 21.8 1.0 C2D D:HEM602 4.1 24.6 1.0 C3D D:HEM602 4.1 23.5 1.0 NE D:ARG354 4.2 23.9 1.0 C2A D:HEM602 4.2 22.8 1.0 C3A D:HEM602 4.2 25.7 1.0 NH2 D:ARG354 4.2 24.2 1.0 C3C D:HEM602 4.3 27.5 1.0 C2C D:HEM602 4.3 28.4 1.0 C2B D:HEM602 4.3 26.2 1.0 C3B D:HEM602 4.3 28.7 1.0 O D:HOH851 4.4 35.4 1.0 CZ D:PHE161 4.6 23.8 1.0 CG2 D:VAL74 4.6 24.2 1.0 CZ D:ARG354 4.6 24.4 1.0 CD2 D:HIS75 4.7 22.7 1.0 NE2 D:HIS75 4.8 22.2 1.0

S.Chen, J.Li, K.R.Vinothmumar, R.Henderson. Interaction of Human Erythrocyte Catalase with Air-Water Interface in Cryoem To Be Published.