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Iron in PDB 7red: Holo Hemophilin From A. Baumannii

Protein crystallography data

The structure of Holo Hemophilin From A. Baumannii, PDB code: 7red was solved by T.J.Bateman, M.Shah, T.F.Moraes, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.69 / 1.53
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 50.9, 59.55, 63.74, 90, 90, 90
R / Rfree (%) 14.8 / 16.7

Iron Binding Sites:

The binding sites of Iron atom in the Holo Hemophilin From A. Baumannii (pdb code 7red). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Holo Hemophilin From A. Baumannii, PDB code: 7red:

Iron binding site 1 out of 1 in 7red

Go back to Iron Binding Sites List in 7red
Iron binding site 1 out of 1 in the Holo Hemophilin From A. Baumannii


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Holo Hemophilin From A. Baumannii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe301

b:8.6
occ:1.00
FE A:HEM301 0.0 8.6 1.0
NA A:HEM301 2.0 8.3 1.0
NB A:HEM301 2.0 8.6 1.0
NC A:HEM301 2.0 7.1 1.0
ND A:HEM301 2.0 8.0 1.0
NE2 A:HIS43 2.1 8.7 1.0
NE2 A:HIS106 2.1 9.7 1.0
C4A A:HEM301 3.0 9.8 1.0
C1C A:HEM301 3.0 7.4 1.0
C1B A:HEM301 3.0 8.3 1.0
C1A A:HEM301 3.0 10.8 1.0
C4C A:HEM301 3.0 6.6 1.0
C4B A:HEM301 3.0 8.1 1.0
C1D A:HEM301 3.0 8.2 1.0
CD2 A:HIS43 3.1 7.8 1.0
C4D A:HEM301 3.1 11.1 1.0
CD2 A:HIS106 3.1 9.0 1.0
CE1 A:HIS43 3.1 8.3 1.0
CE1 A:HIS106 3.1 11.6 1.0
CHB A:HEM301 3.4 11.2 1.0
CHC A:HEM301 3.4 8.0 1.0
CHD A:HEM301 3.4 8.7 1.0
CHA A:HEM301 3.4 9.6 1.0
CG A:HIS43 4.2 7.0 1.0
ND1 A:HIS43 4.2 8.6 1.0
CG A:HIS106 4.2 9.6 1.0
C3A A:HEM301 4.2 10.5 1.0
ND1 A:HIS106 4.2 10.5 1.0
C2A A:HEM301 4.2 11.6 1.0
C2C A:HEM301 4.2 7.4 1.0
C3C A:HEM301 4.3 8.8 1.0
C2B A:HEM301 4.3 8.0 1.0
C2D A:HEM301 4.3 11.8 1.0
C3B A:HEM301 4.3 9.1 1.0
C3D A:HEM301 4.3 11.1 1.0

Reference:

T.J.Bateman, M.Shah, T.P.Ho, H.E.Shin, C.Pan, G.Harris, J.E.Fegan, E.A.Islam, S.K.Ahn, Y.Hooda, S.D.Gray-Owen, W.Chen, T.F.Moraes. A Slam-Dependent Hemophore Contributes to Heme Acquisition in the Bacterial Pathogen Acinetobacter Baumannii. Nat Commun V. 12 6270 2021.
ISSN: ESSN 2041-1723
PubMed: 34725337
DOI: 10.1038/S41467-021-26545-9
Page generated: Thu Aug 8 23:40:15 2024

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