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Iron in PDB 7rxn: Structure of Rubredoxin From Desulfovibrio Vulgaris at 1.5 A Resolution

Protein crystallography data

The structure of Structure of Rubredoxin From Desulfovibrio Vulgaris at 1.5 A Resolution, PDB code: 7rxn was solved by E.T.Adman, L.C.Sieker, L.H.Jensen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) N/A / 1.50
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 19.993, 41.505, 24.404, 90.00, 107.60, 90.00
R / Rfree (%) n/a / n/a

Iron Binding Sites:

The binding sites of Iron atom in the Structure of Rubredoxin From Desulfovibrio Vulgaris at 1.5 A Resolution (pdb code 7rxn). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Structure of Rubredoxin From Desulfovibrio Vulgaris at 1.5 A Resolution, PDB code: 7rxn:

Iron binding site 1 out of 1 in 7rxn

Go back to Iron Binding Sites List in 7rxn
Iron binding site 1 out of 1 in the Structure of Rubredoxin From Desulfovibrio Vulgaris at 1.5 A Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of Rubredoxin From Desulfovibrio Vulgaris at 1.5 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe53

b:5.8
occ:1.00
SG A:CYS39 2.3 4.3 1.0
SG A:CYS42 2.3 5.3 1.0
SG A:CYS9 2.3 6.2 1.0
SG A:CYS6 2.3 4.5 1.0
CB A:CYS39 3.2 2.0 1.0
CB A:CYS6 3.2 4.1 1.0
CB A:CYS42 3.3 5.5 1.0
CB A:CYS9 3.4 5.2 1.0
N A:CYS9 3.8 5.2 1.0
N A:CYS42 3.8 5.9 1.0
CA A:CYS9 4.1 4.6 1.0
CA A:CYS42 4.2 5.6 1.0
CB A:TYR11 4.3 7.5 1.0
CB A:ALA44 4.4 8.5 1.0
CB A:VAL8 4.5 4.6 1.0
CA A:CYS39 4.6 3.9 1.0
CA A:CYS6 4.7 3.4 1.0
C A:CYS9 4.7 7.5 1.0
N A:ALA44 4.7 3.3 1.0
N A:TYR11 4.8 5.5 1.0
C A:CYS42 4.8 9.4 1.0
N A:GLY10 4.8 3.5 1.0
C A:VAL8 4.8 6.2 1.0
CB A:VAL41 4.8 7.8 1.0
C A:VAL41 4.9 5.4 1.0
N A:GLY43 4.9 5.9 1.0
CZ A:PHE49 5.0 5.5 1.0

Reference:

E.T.Adman, L.C.Sieker, L.H.Jensen. Structure of Rubredoxin From Desulfovibrio Vulgaris at 1.5 A Resolution. J.Mol.Biol. V. 217 337 1991.
ISSN: ISSN 0022-2836
PubMed: 1992166
DOI: 10.1016/0022-2836(91)90547-J
Page generated: Thu Aug 7 05:22:31 2025

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