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Iron in PDB 7sf6: Crystal Structure of Siderophore Binding Protein Fatb From Desulfitobacterium Hafniense

Protein crystallography data

The structure of Crystal Structure of Siderophore Binding Protein Fatb From Desulfitobacterium Hafniense, PDB code: 7sf6 was solved by Y.Kim, H.P.Patel, K.A.Nordquist, K.M.Schaab, J.Sha, G.Babnigg, A.H.Bond, A.Joachimiak, Midwest Center For Structural Genomics, Midwest Centerfor Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.83 / 1.46
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 78.884, 78.884, 122.402, 90, 90, 120
R / Rfree (%) 13.7 / 16.1

Other elements in 7sf6:

The structure of Crystal Structure of Siderophore Binding Protein Fatb From Desulfitobacterium Hafniense also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Siderophore Binding Protein Fatb From Desulfitobacterium Hafniense (pdb code 7sf6). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Siderophore Binding Protein Fatb From Desulfitobacterium Hafniense, PDB code: 7sf6:

Iron binding site 1 out of 1 in 7sf6

Go back to Iron Binding Sites List in 7sf6
Iron binding site 1 out of 1 in the Crystal Structure of Siderophore Binding Protein Fatb From Desulfitobacterium Hafniense


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Siderophore Binding Protein Fatb From Desulfitobacterium Hafniense within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe407

b:14.9
occ:1.00
OH A:TYR316 2.0 15.0 1.0
O4 A:DBS401 2.0 15.1 1.0
O4 A:DBS402 2.1 14.4 1.0
O1 A:DBS401 2.1 15.4 1.0
O1 A:DBS402 2.1 16.4 1.0
ND1 A:HIS251 2.3 14.9 1.0
C4 A:DBS401 2.9 14.8 1.0
C4 A:DBS402 2.9 13.7 1.0
C1 A:DBS401 2.9 15.1 1.0
C1 A:DBS402 3.0 15.6 1.0
CZ A:TYR316 3.1 13.7 1.0
CE1 A:HIS251 3.1 16.5 1.0
CG A:HIS251 3.3 14.9 1.0
CB A:HIS251 3.6 13.9 1.0
CE2 A:TYR316 3.8 13.8 1.0
CE1 A:TYR316 4.1 12.9 1.0
NH2 A:ARG274 4.1 15.9 1.0
NE2 A:HIS107 4.2 16.9 1.0
NH2 A:ARG128 4.2 15.3 1.0
C7 A:DBS401 4.2 16.0 1.0
C7 A:DBS402 4.3 15.5 1.0
O A:HOH616 4.3 23.4 1.0
C16 A:DBS401 4.3 15.0 1.0
NE2 A:HIS251 4.3 16.6 1.0
C16 A:DBS402 4.3 16.2 1.0
NE A:ARG274 4.3 14.7 1.0
NE A:ARG128 4.3 15.2 1.0
NH1 A:ARG227 4.4 15.3 1.0
CD2 A:HIS251 4.4 17.4 1.0
N1 A:DBS401 4.7 19.3 1.0
CZ A:ARG274 4.7 15.7 1.0
CZ A:ARG128 4.7 14.0 1.0
N1 A:DBS402 4.8 19.6 1.0
NH2 A:ARG227 4.8 15.2 1.0
CE1 A:HIS107 4.8 17.6 1.0
O15 A:DBS401 4.8 33.4 1.0

Reference:

Y.Kim, H.P.Patel, K.A.Nordquist, K.M.Schaab, J.Sha, G.Babnigg, A.H.Bond, A.Joachimiak, Midwest Center For Structural Genomics. Crystal Structure of Siderophore Binding Protein Fatb From Desulfitobacterium Hafniense To Be Published.
Page generated: Fri Aug 9 00:51:31 2024

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