Iron in PDB 7uv9: KDM2A-Nucleosome Structure Stabilized By H3K36C-UNC8015 Covalent Conjugate

All present enzymatic activity of KDM2A-Nucleosome Structure Stabilized By H3K36C-UNC8015 Covalent Conjugate:
1.14.11.27;

The binding sites of Iron atom in the KDM2A-Nucleosome Structure Stabilized By H3K36C-UNC8015 Covalent Conjugate (pdb code 7uv9). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the KDM2A-Nucleosome Structure Stabilized By H3K36C-UNC8015 Covalent Conjugate, PDB code: 7uv9:

Iron binding site 1 out of 1 in the KDM2A-Nucleosome Structure Stabilized By H3K36C-UNC8015 Covalent Conjugate


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of KDM2A-Nucleosome Structure Stabilized By H3K36C-UNC8015 Covalent Conjugate within 5.0Å range: probe atom residue distance (Å) B Occ K:Fe702 b:64.4 occ:1.00 O K:OH0701 2.0 83.6 1.0 OD1 K:ASP214 2.2 63.4 1.0 O3 K:OH0701 2.2 83.6 1.0 NE2 K:HIS212 2.2 72.6 1.0 NE2 K:HIS284 2.2 67.5 1.0 C6 K:OH0701 2.8 83.6 1.0 N K:OH0701 2.8 83.6 1.0 CG K:ASP214 3.1 63.4 1.0 CE1 K:HIS284 3.1 67.5 1.0 CD2 K:HIS212 3.2 72.6 1.0 CE1 K:HIS212 3.2 72.6 1.0 CD2 K:HIS284 3.2 67.5 1.0 OD2 K:ASP214 3.3 63.4 1.0 C7 K:OH0701 4.2 83.6 1.0 C5 K:OH0701 4.2 83.6 1.0 ND1 K:HIS284 4.2 67.5 1.0 ND1 K:HIS212 4.3 72.6 1.0 CG K:HIS212 4.3 72.6 1.0 CG K:HIS284 4.3 67.5 1.0 CB K:ASP214 4.5 63.4 1.0 C3 K:OH0701 4.7 83.6 1.0 C4 K:OH0701 4.7 83.6 1.0 CA K:ASP214 4.8 63.4 1.0 N K:ASP214 4.9 63.4 1.0 C8 K:OH0701 4.9 83.6 1.0

C.J.Spangler, A.Skrajna, C.A.Foley, A.Nguyen, G.R.Budziszewski, D.N.Azzam, E.C.Arteaga, H.C.Simmons, C.B.Smith, E.M.Wilkerson, J.-M.E.Mcpherson, N.A.Wesley, D.Kireev, L.I.James, S.V.Frye, D.Goldfarb, R.K.Mcginty. Structural Basis of Paralog-Specific KDM2A/B Nucleosome Recognition Nat.Chem.Biol. 2023.
ISSN: ESSN 1552-4469
DOI: 10.1038/S41589-023-01256-Y