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Iron in PDB 7v57: Structure of Adav

Protein crystallography data

The structure of Structure of Adav, PDB code: 7v57 was solved by Z.Y.Zhang, W.Q.Chen, G.Q.Zhai, M.Zhang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.85 / 2.35
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 139.45, 139.45, 48.103, 90, 90, 120
R / Rfree (%) 20.9 / 23.8

Other elements in 7v57:

The structure of Structure of Adav also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Structure of Adav (pdb code 7v57). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Structure of Adav, PDB code: 7v57:

Iron binding site 1 out of 1 in 7v57

Go back to Iron Binding Sites List in 7v57
Iron binding site 1 out of 1 in the Structure of Adav


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of Adav within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe401

b:86.3
occ:1.00
O1 A:AKG403 2.2 114.5 1.0
NE2 A:HIS194 2.3 59.4 1.0
CL A:CL402 2.3 81.8 1.0
O5 A:AKG403 2.4 89.1 1.0
NE2 A:HIS252 2.5 49.3 1.0
C1 A:AKG403 2.9 101.8 1.0
C2 A:AKG403 3.0 93.1 1.0
CE1 A:HIS194 3.2 56.8 1.0
CD2 A:HIS194 3.3 55.9 1.0
CD2 A:HIS252 3.3 47.4 1.0
CE1 A:HIS252 3.5 46.3 1.0
O2 A:AKG403 4.1 110.6 1.0
O A:HOH528 4.2 52.1 1.0
ND1 A:HIS194 4.3 58.7 1.0
CG A:HIS194 4.4 55.7 1.0
C3 A:AKG403 4.4 86.2 1.0
CG A:HIS252 4.5 44.3 1.0
ND1 A:HIS252 4.6 45.8 1.0
CZ A:PHE271 4.8 47.7 1.0
O A:HOH553 4.8 30.3 1.0
CE1 A:PHE271 4.9 46.2 1.0

Reference:

Z.Y.Zhang, G.Q.Zhai. An FE2+ and A-Ketoglutarate-Dependent Halogenase To Be Published.
Page generated: Thu Aug 7 07:31:56 2025

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