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Iron in PDB 7vfp: Cytochrome C-Type Biogenesis Protein Ccmabcd From E. Coli in Complex with Heme and Single Atp

Enzymatic activity of Cytochrome C-Type Biogenesis Protein Ccmabcd From E. Coli in Complex with Heme and Single Atp

All present enzymatic activity of Cytochrome C-Type Biogenesis Protein Ccmabcd From E. Coli in Complex with Heme and Single Atp:
7.6.2.5;

Other elements in 7vfp:

The structure of Cytochrome C-Type Biogenesis Protein Ccmabcd From E. Coli in Complex with Heme and Single Atp also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Cytochrome C-Type Biogenesis Protein Ccmabcd From E. Coli in Complex with Heme and Single Atp (pdb code 7vfp). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Cytochrome C-Type Biogenesis Protein Ccmabcd From E. Coli in Complex with Heme and Single Atp, PDB code: 7vfp:

Iron binding site 1 out of 1 in 7vfp

Go back to Iron Binding Sites List in 7vfp
Iron binding site 1 out of 1 in the Cytochrome C-Type Biogenesis Protein Ccmabcd From E. Coli in Complex with Heme and Single Atp


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cytochrome C-Type Biogenesis Protein Ccmabcd From E. Coli in Complex with Heme and Single Atp within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe301

b:138.5
occ:1.00
FE C:HEM301 0.0 138.5 1.0
ND C:HEM301 2.0 138.5 1.0
NB C:HEM301 2.0 138.5 1.0
NC C:HEM301 2.1 138.5 1.0
NA C:HEM301 2.1 138.5 1.0
C1A C:HEM301 3.0 138.5 1.0
C4A C:HEM301 3.0 138.5 1.0
C4D C:HEM301 3.0 138.5 1.0
C1C C:HEM301 3.1 138.5 1.0
C1B C:HEM301 3.1 138.5 1.0
C4B C:HEM301 3.1 138.5 1.0
C1D C:HEM301 3.1 138.5 1.0
C4C C:HEM301 3.1 138.5 1.0
CHA C:HEM301 3.4 138.5 1.0
CHC C:HEM301 3.4 138.5 1.0
CHB C:HEM301 3.4 138.5 1.0
CHD C:HEM301 3.5 138.5 1.0
C2A C:HEM301 4.2 138.5 1.0
C3A C:HEM301 4.2 138.5 1.0
C2C C:HEM301 4.3 138.5 1.0
C3D C:HEM301 4.3 138.5 1.0
C2B C:HEM301 4.3 138.5 1.0
C2D C:HEM301 4.3 138.5 1.0
C3B C:HEM301 4.3 138.5 1.0
C3C C:HEM301 4.3 138.5 1.0
CD C:ARG128 4.4 116.6 1.0
NE2 C:HIS60 4.4 98.8 1.0
CG2 C:VAL61 4.6 94.9 1.0
CD2 C:HIS60 4.8 98.8 1.0
CZ3 C:TRP114 4.8 99.8 1.0
NH1 C:ARG128 5.0 116.6 1.0

Reference:

J.Li, W.Zheng, M.Gu, L.Han, Y.Luo, K.Yu, M.Sun, Y.Zong, X.Ma, B.Liu, E.P.Lowder, D.L.Mendez, R.G.Kranz, K.Zhang, J.Zhu. Structures of the Ccmabcd Heme Release Complex at Multiple States. Nat Commun V. 13 6422 2022.
ISSN: ESSN 2041-1723
PubMed: 36307425
DOI: 10.1038/S41467-022-34136-5
Page generated: Fri Aug 9 05:29:14 2024

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