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Iron in PDB 7wff: Subcomplexes B,M and L in the Cylic Electron Transfer Supercomplex Ndh-Psi From Arabidopsis

Enzymatic activity of Subcomplexes B,M and L in the Cylic Electron Transfer Supercomplex Ndh-Psi From Arabidopsis

All present enzymatic activity of Subcomplexes B,M and L in the Cylic Electron Transfer Supercomplex Ndh-Psi From Arabidopsis:
5.2.1.8;

Iron Binding Sites:

The binding sites of Iron atom in the Subcomplexes B,M and L in the Cylic Electron Transfer Supercomplex Ndh-Psi From Arabidopsis (pdb code 7wff). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Subcomplexes B,M and L in the Cylic Electron Transfer Supercomplex Ndh-Psi From Arabidopsis, PDB code: 7wff:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 7wff

Go back to Iron Binding Sites List in 7wff
Iron binding site 1 out of 2 in the Subcomplexes B,M and L in the Cylic Electron Transfer Supercomplex Ndh-Psi From Arabidopsis


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Subcomplexes B,M and L in the Cylic Electron Transfer Supercomplex Ndh-Psi From Arabidopsis within 5.0Å range:
probe atom residue distance (Å) B Occ
c:Fe301

b:101.5
occ:1.00
FE1 c:FES301 0.0 101.5 1.0
S2 c:FES301 2.2 101.5 1.0
S1 c:FES301 2.2 101.5 1.0
SG c:CYS120 2.3 66.0 1.0
SG c:CYS126 2.3 64.8 1.0
FE2 c:FES301 3.1 101.5 1.0
CB c:CYS120 3.3 66.0 1.0
N c:CYS120 3.6 66.0 1.0
OG1 c:THR128 3.6 62.2 1.0
CB c:CYS126 3.7 64.8 1.0
O c:CYS126 3.8 64.8 1.0
N c:CYS126 3.8 64.8 1.0
CA c:CYS120 3.9 66.0 1.0
CA c:CYS126 4.1 64.8 1.0
C c:CYS126 4.1 64.8 1.0
N c:ALA121 4.2 67.1 1.0
C c:CYS120 4.2 66.0 1.0
N c:GLY124 4.3 69.5 1.0
N c:THR125 4.3 64.3 1.0
CA c:GLY124 4.3 69.5 1.0
SG c:CYS162 4.5 73.6 1.0
C c:GLY124 4.5 69.5 1.0
N c:GLY122 4.6 70.3 1.0
C c:ASN119 4.7 60.2 1.0
CB c:ASN119 4.8 60.2 1.0
N c:THR128 4.8 62.2 1.0
SG c:CYS129 4.9 67.3 1.0
C c:THR125 4.9 64.3 1.0
CB c:THR128 4.9 62.2 1.0

Iron binding site 2 out of 2 in 7wff

Go back to Iron Binding Sites List in 7wff
Iron binding site 2 out of 2 in the Subcomplexes B,M and L in the Cylic Electron Transfer Supercomplex Ndh-Psi From Arabidopsis


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Subcomplexes B,M and L in the Cylic Electron Transfer Supercomplex Ndh-Psi From Arabidopsis within 5.0Å range:
probe atom residue distance (Å) B Occ
c:Fe301

b:101.5
occ:1.00
FE2 c:FES301 0.0 101.5 1.0
S2 c:FES301 2.2 101.5 1.0
S1 c:FES301 2.2 101.5 1.0
SG c:CYS129 2.2 67.3 1.0
SG c:CYS162 2.3 73.6 1.0
FE1 c:FES301 3.1 101.5 1.0
CB c:CYS162 3.5 73.6 1.0
CB c:CYS129 3.5 67.3 1.0
N c:CYS162 4.2 73.6 1.0
N c:CYS129 4.3 67.3 1.0
CA c:CYS162 4.4 73.6 1.0
CA c:CYS129 4.5 67.3 1.0
SG c:CYS120 4.5 66.0 1.0
N c:GLY122 4.7 70.3 1.0
CA c:GLY122 4.7 70.3 1.0
CD2 c:LEU160 4.8 69.0 1.0
CA c:GLY124 4.8 69.5 1.0
CB c:LEU160 4.8 69.0 1.0
N c:GLY124 4.8 69.5 1.0
CD c:ARG99 4.8 71.8 1.0
OG1 c:THR128 4.8 62.2 1.0
C c:GLY122 4.9 70.3 1.0
OH c:TYR110 4.9 61.1 1.0
SG c:CYS126 4.9 64.8 1.0
CE1 c:TYR110 5.0 61.1 1.0

Reference:

X.Su, D.Cao, X.Pan, L.Shi, Z.Liu, L.Dall'osto, R.Bassi, X.Zhang, M.Li. Supramolecular Assembly of Chloroplast Nadh Dehydrogenase-Like Complex with Photosystem I From Arabidopsis Thaliana. Mol Plant V. 15 454 2022.
ISSN: ESSN 1752-9867
PubMed: 35123031
DOI: 10.1016/J.MOLP.2022.01.020
Page generated: Thu Aug 7 09:51:48 2025

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