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Iron in PDB 7wzn: Psi-Lhci From Chlamydomonas Reinhardtii with Bound Ferredoxin

Enzymatic activity of Psi-Lhci From Chlamydomonas Reinhardtii with Bound Ferredoxin

All present enzymatic activity of Psi-Lhci From Chlamydomonas Reinhardtii with Bound Ferredoxin:
1.97.1.12;

Other elements in 7wzn:

The structure of Psi-Lhci From Chlamydomonas Reinhardtii with Bound Ferredoxin also contains other interesting chemical elements:

Magnesium (Mg) 205 atoms

Iron Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 14;

Binding sites:

The binding sites of Iron atom in the Psi-Lhci From Chlamydomonas Reinhardtii with Bound Ferredoxin (pdb code 7wzn). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 14 binding sites of Iron where determined in the Psi-Lhci From Chlamydomonas Reinhardtii with Bound Ferredoxin, PDB code: 7wzn:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Iron binding site 1 out of 14 in 7wzn

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Iron binding site 1 out of 14 in the Psi-Lhci From Chlamydomonas Reinhardtii with Bound Ferredoxin


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Psi-Lhci From Chlamydomonas Reinhardtii with Bound Ferredoxin within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe803

b:196.7
occ:1.00
FE1 B:SF4803 0.0 196.7 1.0
S2 B:SF4803 2.3 196.7 1.0
S3 B:SF4803 2.3 196.7 1.0
S4 B:SF4803 2.3 196.7 1.0
FE3 B:SF4803 2.7 196.7 1.0
FE4 B:SF4803 2.7 196.7 1.0
FE2 B:SF4803 2.7 196.7 1.0
S1 B:SF4803 3.9 196.7 1.0
O B:THR568 4.1 203.8 1.0
CB B:CYS569 4.4 199.7 1.0
CA B:CYS569 4.8 199.7 1.0
C B:THR568 4.9 203.8 1.0

Iron binding site 2 out of 14 in 7wzn

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Iron binding site 2 out of 14 in the Psi-Lhci From Chlamydomonas Reinhardtii with Bound Ferredoxin


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Psi-Lhci From Chlamydomonas Reinhardtii with Bound Ferredoxin within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe803

b:196.7
occ:1.00
FE2 B:SF4803 0.0 196.7 1.0
S1 B:SF4803 2.3 196.7 1.0
S4 B:SF4803 2.3 196.7 1.0
S3 B:SF4803 2.3 196.7 1.0
FE1 B:SF4803 2.7 196.7 1.0
FE3 B:SF4803 2.7 196.7 1.0
FE4 B:SF4803 2.7 196.7 1.0
CB A:CYS584 3.8 167.2 1.0
S2 B:SF4803 3.9 196.7 1.0
CA A:CYS584 4.2 167.2 1.0
O A:GLY577 4.3 193.8 1.0
N A:CYS584 4.4 167.2 1.0
C A:GLY577 4.7 193.8 1.0
N A:PRO578 4.9 188.6 1.0
CB A:CYS575 4.9 173.8 1.0
CA A:PRO578 4.9 188.6 1.0
CB A:PRO578 5.0 188.6 1.0

Iron binding site 3 out of 14 in 7wzn

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Iron binding site 3 out of 14 in the Psi-Lhci From Chlamydomonas Reinhardtii with Bound Ferredoxin


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Psi-Lhci From Chlamydomonas Reinhardtii with Bound Ferredoxin within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe803

b:196.7
occ:1.00
FE3 B:SF4803 0.0 196.7 1.0
S2 B:SF4803 2.3 196.7 1.0
S4 B:SF4803 2.3 196.7 1.0
S1 B:SF4803 2.3 196.7 1.0
FE1 B:SF4803 2.7 196.7 1.0
FE4 B:SF4803 2.7 196.7 1.0
FE2 B:SF4803 2.7 196.7 1.0
CB B:PRO563 3.4 198.1 1.0
N B:PRO563 3.5 198.1 1.0
CB A:CYS575 3.8 173.8 1.0
C B:GLY562 3.8 209.9 1.0
CA B:PRO563 3.9 198.1 1.0
S3 B:SF4803 3.9 196.7 1.0
O B:GLY562 4.3 209.9 1.0
CA B:GLY562 4.4 209.9 1.0
O A:GLY577 4.6 193.8 1.0
C A:GLY577 4.7 193.8 1.0
CA A:GLY577 4.7 193.8 1.0
N A:GLY577 4.8 193.8 1.0
CA A:CYS575 5.0 173.8 1.0

Iron binding site 4 out of 14 in 7wzn

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Iron binding site 4 out of 14 in the Psi-Lhci From Chlamydomonas Reinhardtii with Bound Ferredoxin


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Psi-Lhci From Chlamydomonas Reinhardtii with Bound Ferredoxin within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe803

b:196.7
occ:1.00
FE4 B:SF4803 0.0 196.7 1.0
S2 B:SF4803 2.3 196.7 1.0
S3 B:SF4803 2.3 196.7 1.0
S1 B:SF4803 2.3 196.7 1.0
FE3 B:SF4803 2.7 196.7 1.0
FE1 B:SF4803 2.7 196.7 1.0
FE2 B:SF4803 2.7 196.7 1.0
O B:THR568 3.0 203.8 1.0
C B:GLY562 3.2 209.9 1.0
O B:GLY562 3.2 209.9 1.0
CA B:GLY562 3.2 209.9 1.0
CB B:CYS560 3.5 195.5 1.0
N B:GLY562 3.7 209.9 1.0
N B:PRO563 3.9 198.1 1.0
S4 B:SF4803 3.9 196.7 1.0
C B:THR568 4.1 203.8 1.0
CA B:PRO563 4.6 198.1 1.0
N B:THR568 4.9 203.8 1.0
CA B:CYS560 4.9 195.5 1.0
C B:ASP561 5.0 211.1 1.0
CA B:THR568 5.0 203.8 1.0

Iron binding site 5 out of 14 in 7wzn

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Iron binding site 5 out of 14 in the Psi-Lhci From Chlamydomonas Reinhardtii with Bound Ferredoxin


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of Psi-Lhci From Chlamydomonas Reinhardtii with Bound Ferredoxin within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe101

b:230.5
occ:1.00
FE1 C:SF4101 0.0 230.5 1.0
S2 C:SF4101 2.3 230.5 1.0
S4 C:SF4101 2.3 230.5 1.0
S3 C:SF4101 2.3 230.5 1.0
FE2 C:SF4101 2.7 230.5 1.0
FE3 C:SF4101 2.7 230.5 1.0
FE4 C:SF4101 2.7 230.5 1.0
N C:CYS51 2.8 205.5 1.0
N C:LYS52 2.8 222.4 1.0
C C:CYS51 3.2 205.5 1.0
CA C:CYS51 3.3 205.5 1.0
CB C:CYS51 3.6 205.5 1.0
C C:GLY50 3.6 207.3 1.0
S1 C:SF4101 3.9 230.5 1.0
CA C:LYS52 3.9 222.4 1.0
N C:GLY50 4.0 207.3 1.0
CA C:GLY50 4.1 207.3 1.0
O C:CYS51 4.1 205.5 1.0
N C:ARG53 4.2 210.0 1.0
C C:LYS52 4.5 222.4 1.0
O C:GLY50 4.6 207.3 1.0
N C:VAL49 4.8 202.7 1.0
C C:VAL49 4.8 202.7 1.0

Iron binding site 6 out of 14 in 7wzn

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Iron binding site 6 out of 14 in the Psi-Lhci From Chlamydomonas Reinhardtii with Bound Ferredoxin


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of Psi-Lhci From Chlamydomonas Reinhardtii with Bound Ferredoxin within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe101

b:230.5
occ:1.00
FE2 C:SF4101 0.0 230.5 1.0
S3 C:SF4101 2.3 230.5 1.0
S1 C:SF4101 2.3 230.5 1.0
S4 C:SF4101 2.3 230.5 1.0
FE4 C:SF4101 2.7 230.5 1.0
FE1 C:SF4101 2.7 230.5 1.0
FE3 C:SF4101 2.7 230.5 1.0
CB C:CYS21 3.0 222.2 1.0
CA C:CYS21 3.0 222.2 1.0
S2 C:SF4101 3.9 230.5 1.0
C C:CYS21 3.9 222.2 1.0
N C:PRO22 4.0 208.9 1.0
N C:CYS21 4.1 222.2 1.0
CB C:CYS54 4.6 235.5 1.0
N C:CYS54 4.6 235.5 1.0
N C:LEU23 4.7 230.5 1.0
O C:ALA20 4.8 218.3 1.0
C C:ALA20 4.8 218.3 1.0
N C:LYS52 4.9 222.4 1.0
O C:CYS21 4.9 222.2 1.0
N C:ARG53 5.0 210.0 1.0

Iron binding site 7 out of 14 in 7wzn

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Iron binding site 7 out of 14 in the Psi-Lhci From Chlamydomonas Reinhardtii with Bound Ferredoxin


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 7 of Psi-Lhci From Chlamydomonas Reinhardtii with Bound Ferredoxin within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe101

b:230.5
occ:1.00
FE3 C:SF4101 0.0 230.5 1.0
S4 C:SF4101 2.3 230.5 1.0
S2 C:SF4101 2.3 230.5 1.0
S1 C:SF4101 2.3 230.5 1.0
FE4 C:SF4101 2.7 230.5 1.0
FE1 C:SF4101 2.7 230.5 1.0
FE2 C:SF4101 2.7 230.5 1.0
CB C:CYS54 3.1 235.5 1.0
N C:LYS52 3.2 222.4 1.0
CA C:LYS52 3.2 222.4 1.0
N C:CYS54 3.3 235.5 1.0
C C:LYS52 3.5 222.4 1.0
N C:ARG53 3.6 210.0 1.0
CA C:CYS54 3.8 235.5 1.0
S3 C:SF4101 3.9 230.5 1.0
O C:LYS52 4.2 222.4 1.0
C C:CYS51 4.3 205.5 1.0
C C:ARG53 4.4 210.0 1.0
N C:GLU55 4.5 230.4 1.0
CA C:ARG53 4.6 210.0 1.0
CB C:LYS52 4.7 222.4 1.0
C C:CYS54 4.7 235.5 1.0
N C:CYS51 4.9 205.5 1.0
O C:CYS51 4.9 205.5 1.0

Iron binding site 8 out of 14 in 7wzn

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Iron binding site 8 out of 14 in the Psi-Lhci From Chlamydomonas Reinhardtii with Bound Ferredoxin


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 8 of Psi-Lhci From Chlamydomonas Reinhardtii with Bound Ferredoxin within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe101

b:230.5
occ:1.00
FE4 C:SF4101 0.0 230.5 1.0
S1 C:SF4101 2.3 230.5 1.0
S3 C:SF4101 2.3 230.5 1.0
S2 C:SF4101 2.3 230.5 1.0
FE2 C:SF4101 2.7 230.5 1.0
FE3 C:SF4101 2.7 230.5 1.0
FE1 C:SF4101 2.7 230.5 1.0
CB C:CYS48 3.3 220.6 1.0
S4 C:SF4101 3.9 230.5 1.0
CA C:CYS48 4.0 220.6 1.0
CB C:VAL25 4.4 231.2 1.0
N C:GLY50 4.5 207.3 1.0
N C:LYS52 4.7 222.4 1.0
CA C:GLY50 4.8 207.3 1.0
C C:CYS48 4.8 220.6 1.0
N C:CYS51 4.9 205.5 1.0
N C:VAL49 4.9 202.7 1.0

Iron binding site 9 out of 14 in 7wzn

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Iron binding site 9 out of 14 in the Psi-Lhci From Chlamydomonas Reinhardtii with Bound Ferredoxin


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 9 of Psi-Lhci From Chlamydomonas Reinhardtii with Bound Ferredoxin within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe102

b:232.5
occ:1.00
FE1 C:SF4102 0.0 232.5 1.0
S2 C:SF4102 2.3 232.5 1.0
S4 C:SF4102 2.3 232.5 1.0
S3 C:SF4102 2.3 232.5 1.0
FE4 C:SF4102 2.7 232.5 1.0
FE3 C:SF4102 2.7 232.5 1.0
FE2 C:SF4102 2.7 232.5 1.0
CB C:CYS58 3.1 233.3 1.0
CA C:CYS58 3.2 233.3 1.0
S1 C:SF4102 3.9 232.5 1.0
N C:PRO59 3.9 215.0 1.0
C C:CYS58 3.9 233.3 1.0
CB C:SER64 4.0 234.5 1.0
N C:CYS58 4.4 233.3 1.0
CB C:THR60 4.6 242.6 1.0
N C:THR60 4.7 242.6 1.0
CB C:CYS17 4.9 238.3 1.0
O C:ALA57 5.0 226.1 1.0
N C:CYS17 5.0 238.3 1.0
O C:CYS58 5.0 233.3 1.0

Iron binding site 10 out of 14 in 7wzn

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Iron binding site 10 out of 14 in the Psi-Lhci From Chlamydomonas Reinhardtii with Bound Ferredoxin


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 10 of Psi-Lhci From Chlamydomonas Reinhardtii with Bound Ferredoxin within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe102

b:232.5
occ:1.00
FE2 C:SF4102 0.0 232.5 1.0
S4 C:SF4102 2.3 232.5 1.0
S1 C:SF4102 2.3 232.5 1.0
S3 C:SF4102 2.3 232.5 1.0
FE3 C:SF4102 2.7 232.5 1.0
FE1 C:SF4102 2.7 232.5 1.0
FE4 C:SF4102 2.7 232.5 1.0
CB C:CYS17 2.9 238.3 1.0
N C:CYS17 3.2 238.3 1.0
CA C:CYS17 3.7 238.3 1.0
S2 C:SF4102 3.9 232.5 1.0
N C:THR15 3.9 227.3 1.0
N C:GLN16 4.0 222.2 1.0
C C:THR15 4.0 227.3 1.0
CA C:THR15 4.1 227.3 1.0
C C:GLN16 4.4 222.2 1.0
N C:VAL18 4.5 228.8 1.0
CB C:ALA40 4.5 222.6 1.0
O C:THR15 4.6 227.3 1.0
C C:CYS17 4.6 238.3 1.0
CB C:CYS58 4.7 233.3 1.0
CA C:GLN16 4.7 222.2 1.0
CA C:CYS58 4.8 233.3 1.0
C C:CYS14 4.9 215.7 1.0

Reference:

G.Kurisu, C.Gerle, A.Kawamoto, K.Mitsuoka, H.Tanaka, Y.Misumi, J.Minagawa, H.Kubota-Kawai, R.Tokotsu, Y.Fujiyoshi, K.Abe, A.Oshima. Structure of Photosystem I From Chlamydomonas Reinhardtii with Bound Ferredoxin To Be Published.
Page generated: Fri Aug 9 10:34:25 2024

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