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Iron in PDB 7zdl: If(Heme/Coordinated) Conformation of Cyddc in Amp-Pnp(Cydc)/Amp- Pnp(Cydd) Bound State (Dataset-8)

Other elements in 7zdl:

The structure of If(Heme/Coordinated) Conformation of Cyddc in Amp-Pnp(Cydc)/Amp- Pnp(Cydd) Bound State (Dataset-8) also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms

Iron Binding Sites:

The binding sites of Iron atom in the If(Heme/Coordinated) Conformation of Cyddc in Amp-Pnp(Cydc)/Amp- Pnp(Cydd) Bound State (Dataset-8) (pdb code 7zdl). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the If(Heme/Coordinated) Conformation of Cyddc in Amp-Pnp(Cydc)/Amp- Pnp(Cydd) Bound State (Dataset-8), PDB code: 7zdl:

Iron binding site 1 out of 1 in 7zdl

Go back to Iron Binding Sites List in 7zdl
Iron binding site 1 out of 1 in the If(Heme/Coordinated) Conformation of Cyddc in Amp-Pnp(Cydc)/Amp- Pnp(Cydd) Bound State (Dataset-8)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of If(Heme/Coordinated) Conformation of Cyddc in Amp-Pnp(Cydc)/Amp- Pnp(Cydd) Bound State (Dataset-8) within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe601

b:37.8
occ:1.00
FE C:HEB601 0.0 37.8 1.0
NA C:HEB601 2.1 37.8 1.0
NB C:HEB601 2.2 37.8 1.0
NC C:HEB601 2.2 37.8 1.0
ND C:HEB601 2.3 37.8 1.0
NE2 D:HIS312 2.6 36.9 1.0
NE2 C:HIS85 2.7 30.7 1.0
C1A C:HEB601 3.2 37.8 1.0
C1C C:HEB601 3.2 37.8 1.0
C1B C:HEB601 3.2 37.8 1.0
C4A C:HEB601 3.2 37.8 1.0
C4B C:HEB601 3.3 37.8 1.0
C4C C:HEB601 3.3 37.8 1.0
C4D C:HEB601 3.4 37.8 1.0
C1D C:HEB601 3.4 37.8 1.0
CD2 C:HIS85 3.5 30.7 1.0
CD2 D:HIS312 3.5 36.9 1.0
CE1 D:HIS312 3.6 36.9 1.0
CHC C:HEB601 3.7 37.8 1.0
CHB C:HEB601 3.7 37.8 1.0
CHA C:HEB601 3.7 37.8 1.0
CE1 C:HIS85 3.8 30.7 1.0
CHD C:HEB601 3.8 37.8 1.0
C2A C:HEB601 4.2 37.8 1.0
C2C C:HEB601 4.2 37.8 1.0
C2B C:HEB601 4.2 37.8 1.0
C3A C:HEB601 4.3 37.8 1.0
C3B C:HEB601 4.3 37.8 1.0
C3C C:HEB601 4.3 37.8 1.0
C2D C:HEB601 4.4 37.8 1.0
C3D C:HEB601 4.6 37.8 1.0
CG C:HIS85 4.7 30.7 1.0
CG D:HIS312 4.7 36.9 1.0
ND1 D:HIS312 4.7 36.9 1.0
ND1 C:HIS85 4.8 30.7 1.0

Reference:

D.Wu, S.Safarian. If(Heme/Coordinated) Conformation of Cyddc in Amp-Pnp(Cydc)/Amp-Pnp(Cydd) Bound State (Dataset-8) To Be Published.
Page generated: Fri Aug 9 14:08:59 2024

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