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Iron in PDB 7zs4: F32V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath)

Protein crystallography data

The structure of F32V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath), PDB code: 7zs4 was solved by H.R.Adams, M.A.Hough, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 74.71 / 1.75
Space group P 21 3
Cell size a, b, c (Å), α, β, γ (°) 105.674, 105.674, 105.674, 90, 90, 90
R / Rfree (%) 18.6 / 21.3

Other elements in 7zs4:

The structure of F32V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath) also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the F32V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath) (pdb code 7zs4). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the F32V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath), PDB code: 7zs4:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 7zs4

Go back to Iron Binding Sites List in 7zs4
Iron binding site 1 out of 2 in the F32V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of F32V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe202

b:30.5
occ:1.00
FE A:HEC202 0.0 30.5 1.0
NC A:HEC202 2.0 34.2 1.0
NE2 A:HIS123 2.0 27.0 1.0
NB A:HEC202 2.1 28.5 1.0
NA A:HEC202 2.1 28.7 1.0
ND A:HEC202 2.1 30.4 1.0
CE1 A:HIS123 3.0 30.3 1.0
C1C A:HEC202 3.0 34.9 1.0
C1B A:HEC202 3.0 29.2 1.0
C4C A:HEC202 3.0 33.6 1.0
C4B A:HEC202 3.1 30.5 1.0
C4A A:HEC202 3.1 29.1 1.0
C1A A:HEC202 3.1 30.5 1.0
CD2 A:HIS123 3.1 28.1 1.0
C1D A:HEC202 3.1 30.1 1.0
C4D A:HEC202 3.1 30.3 1.0
O1 A:PEG203 3.2 60.9 1.0
C1 A:PEG203 3.3 47.0 1.0
CHC A:HEC202 3.3 32.8 1.0
CHB A:HEC202 3.4 26.8 1.0
CHD A:HEC202 3.4 32.0 1.0
CHA A:HEC202 3.4 27.0 1.0
ND1 A:HIS123 4.1 30.3 1.0
C2 A:PEG203 4.2 52.2 1.0
CG A:HIS123 4.2 30.2 1.0
C2C A:HEC202 4.2 36.1 1.0
C3C A:HEC202 4.3 35.6 1.0
C3A A:HEC202 4.3 28.0 1.0
C2A A:HEC202 4.3 30.0 1.0
C2B A:HEC202 4.3 27.9 1.0
C3B A:HEC202 4.3 29.9 1.0
C2D A:HEC202 4.3 33.7 1.0
C3D A:HEC202 4.3 31.3 1.0
CE1 A:PHE133 4.9 37.6 1.0
CD1 A:PHE133 4.9 35.3 1.0

Iron binding site 2 out of 2 in 7zs4

Go back to Iron Binding Sites List in 7zs4
Iron binding site 2 out of 2 in the F32V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of F32V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe201

b:32.9
occ:1.00
FE B:HEC201 0.0 32.9 1.0
ND B:HEC201 2.0 31.6 1.0
NA B:HEC201 2.0 30.2 1.0
NC B:HEC201 2.0 35.8 1.0
NE2 B:HIS123 2.1 31.5 1.0
NB B:HEC201 2.1 33.7 1.0
CE1 B:HIS123 3.0 31.4 1.0
C1A B:HEC201 3.0 29.0 1.0
C4D B:HEC201 3.0 31.3 1.0
C1D B:HEC201 3.0 35.4 1.0
C4B B:HEC201 3.0 32.3 1.0
C1C B:HEC201 3.0 34.9 1.0
C4C B:HEC201 3.1 36.0 1.0
C1B B:HEC201 3.1 31.6 1.0
C4A B:HEC201 3.1 32.1 1.0
CD2 B:HIS123 3.1 34.6 1.0
CHA B:HEC201 3.3 26.9 1.0
CHC B:HEC201 3.3 33.5 1.0
CHD B:HEC201 3.4 33.4 1.0
C4 B:PEG203 3.4 56.9 1.0
CHB B:HEC201 3.5 30.7 1.0
O4 B:PEG203 3.7 64.0 1.0
C3 B:PEG203 3.8 59.3 1.0
ND1 B:HIS123 4.1 32.2 1.0
C2A B:HEC201 4.2 29.4 1.0
CG B:HIS123 4.2 35.3 1.0
C3D B:HEC201 4.2 32.5 1.0
C2D B:HEC201 4.3 32.0 1.0
C2C B:HEC201 4.3 34.6 1.0
C3A B:HEC201 4.3 29.6 1.0
C3B B:HEC201 4.3 34.7 1.0
C3C B:HEC201 4.3 36.1 1.0
C2B B:HEC201 4.3 32.0 1.0
CE2 B:PHE133 4.8 37.0 1.0
CD2 B:PHE133 4.8 35.4 1.0

Reference:

H.R.Adams, R.W.Strange, D.A.Svistunenko, C.R.Andrew, M.A.Hough. F32V Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath) To Be Published.
Page generated: Fri Aug 9 15:18:16 2024

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