Iron in PDB 8abf: Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, Int-Position
Enzymatic activity of Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, Int-Position
All present enzymatic activity of Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, Int-Position:
7.1.1.8;
Iron Binding Sites:
The binding sites of Iron atom in the Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, Int-Position
(pdb code 8abf). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 8 binding sites of Iron where determined in the
Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, Int-Position, PDB code: 8abf:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
Iron binding site 1 out
of 8 in 8abf
Go back to
Iron Binding Sites List in 8abf
Iron binding site 1 out
of 8 in the Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, Int-Position
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, Int-Position within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe501
b:24.2
occ:1.00
|
FE
|
C:HEM501
|
0.0
|
24.2
|
1.0
|
|
ND
|
C:HEM501
|
1.9
|
25.2
|
1.0
|
|
NA
|
C:HEM501
|
2.0
|
26.1
|
1.0
|
|
NE2
|
C:HIS82
|
2.0
|
24.1
|
1.0
|
|
NC
|
C:HEM501
|
2.1
|
26.4
|
1.0
|
|
NE2
|
C:HIS183
|
2.1
|
23.6
|
1.0
|
|
NB
|
C:HEM501
|
2.1
|
26.7
|
1.0
|
|
C1D
|
C:HEM501
|
2.9
|
25.2
|
1.0
|
|
C4D
|
C:HEM501
|
2.9
|
25.6
|
1.0
|
|
C1A
|
C:HEM501
|
3.0
|
25.7
|
1.0
|
|
CE1
|
C:HIS82
|
3.0
|
23.7
|
1.0
|
|
C4A
|
C:HEM501
|
3.0
|
26.3
|
1.0
|
|
CE1
|
C:HIS183
|
3.0
|
22.9
|
1.0
|
|
C4C
|
C:HEM501
|
3.0
|
26.0
|
1.0
|
|
C4B
|
C:HEM501
|
3.1
|
27.0
|
1.0
|
|
C1C
|
C:HEM501
|
3.1
|
28.2
|
1.0
|
|
C1B
|
C:HEM501
|
3.1
|
26.6
|
1.0
|
|
CD2
|
C:HIS82
|
3.1
|
23.3
|
1.0
|
|
CD2
|
C:HIS183
|
3.1
|
22.7
|
1.0
|
|
CHD
|
C:HEM501
|
3.4
|
25.6
|
1.0
|
|
CHA
|
C:HEM501
|
3.4
|
25.9
|
1.0
|
|
CHB
|
C:HEM501
|
3.4
|
26.3
|
1.0
|
|
CHC
|
C:HEM501
|
3.5
|
26.9
|
1.0
|
|
ND1
|
C:HIS82
|
4.1
|
23.1
|
1.0
|
|
ND1
|
C:HIS183
|
4.1
|
22.7
|
1.0
|
|
C2A
|
C:HEM501
|
4.2
|
27.4
|
1.0
|
|
C2D
|
C:HEM501
|
4.2
|
26.9
|
1.0
|
|
C3A
|
C:HEM501
|
4.2
|
26.8
|
1.0
|
|
C3D
|
C:HEM501
|
4.2
|
27.3
|
1.0
|
|
CG
|
C:HIS82
|
4.2
|
24.6
|
1.0
|
|
CG
|
C:HIS183
|
4.2
|
23.5
|
1.0
|
|
C3C
|
C:HEM501
|
4.2
|
28.1
|
1.0
|
|
C2C
|
C:HEM501
|
4.3
|
28.6
|
1.0
|
|
C3B
|
C:HEM501
|
4.3
|
27.6
|
1.0
|
|
C2B
|
C:HEM501
|
4.3
|
27.7
|
1.0
|
|
CA
|
C:GLY131
|
4.8
|
30.8
|
1.0
|
|
NE2
|
C:GLN43
|
4.9
|
27.1
|
1.0
|
|
Iron binding site 2 out
of 8 in 8abf
Go back to
Iron Binding Sites List in 8abf
Iron binding site 2 out
of 8 in the Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, Int-Position
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, Int-Position within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe502
b:25.0
occ:1.00
|
FE
|
C:HEM502
|
0.0
|
25.0
|
1.0
|
|
ND
|
C:HEM502
|
1.9
|
25.7
|
1.0
|
|
NA
|
C:HEM502
|
2.0
|
25.5
|
1.0
|
|
NC
|
C:HEM502
|
2.1
|
24.9
|
1.0
|
|
NB
|
C:HEM502
|
2.1
|
24.9
|
1.0
|
|
NE2
|
C:HIS197
|
2.1
|
23.2
|
1.0
|
|
NE2
|
C:HIS96
|
2.2
|
23.8
|
1.0
|
|
C4D
|
C:HEM502
|
2.9
|
25.7
|
1.0
|
|
C1D
|
C:HEM502
|
2.9
|
25.7
|
1.0
|
|
C4C
|
C:HEM502
|
3.0
|
25.2
|
1.0
|
|
C1A
|
C:HEM502
|
3.0
|
26.3
|
1.0
|
|
C4A
|
C:HEM502
|
3.0
|
25.9
|
1.0
|
|
CE1
|
C:HIS197
|
3.0
|
23.6
|
1.0
|
|
C1B
|
C:HEM502
|
3.1
|
25.5
|
1.0
|
|
C4B
|
C:HEM502
|
3.1
|
25.0
|
1.0
|
|
C1C
|
C:HEM502
|
3.1
|
25.1
|
1.0
|
|
CD2
|
C:HIS96
|
3.2
|
24.8
|
1.0
|
|
CD2
|
C:HIS197
|
3.2
|
23.9
|
1.0
|
|
CE1
|
C:HIS96
|
3.2
|
24.1
|
1.0
|
|
CHA
|
C:HEM502
|
3.4
|
26.3
|
1.0
|
|
CHD
|
C:HEM502
|
3.4
|
24.8
|
1.0
|
|
CHB
|
C:HEM502
|
3.5
|
25.4
|
1.0
|
|
CHC
|
C:HEM502
|
3.5
|
25.2
|
1.0
|
|
C3C
|
C:HEM502
|
4.2
|
25.0
|
1.0
|
|
C3D
|
C:HEM502
|
4.2
|
27.4
|
1.0
|
|
C2A
|
C:HEM502
|
4.2
|
27.6
|
1.0
|
|
C2D
|
C:HEM502
|
4.2
|
26.1
|
1.0
|
|
C3A
|
C:HEM502
|
4.2
|
26.7
|
1.0
|
|
ND1
|
C:HIS197
|
4.2
|
23.1
|
1.0
|
|
C2C
|
C:HEM502
|
4.2
|
24.9
|
1.0
|
|
CG
|
C:HIS96
|
4.3
|
25.4
|
1.0
|
|
ND1
|
C:HIS96
|
4.3
|
25.7
|
1.0
|
|
C2B
|
C:HEM502
|
4.3
|
26.0
|
1.0
|
|
CG
|
C:HIS197
|
4.3
|
23.5
|
1.0
|
|
C3B
|
C:HEM502
|
4.3
|
25.4
|
1.0
|
|
Iron binding site 3 out
of 8 in 8abf
Go back to
Iron Binding Sites List in 8abf
Iron binding site 3 out
of 8 in the Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, Int-Position
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, Int-Position within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
P:Fe301
b:170.4
occ:1.00
|
FE1
|
P:FES301
|
0.0
|
170.4
|
1.0
|
|
SG
|
P:CYS168
|
2.2
|
138.9
|
1.0
|
|
S2
|
P:FES301
|
2.2
|
172.4
|
1.0
|
|
S1
|
P:FES301
|
2.2
|
173.5
|
1.0
|
|
SG
|
P:CYS187
|
2.3
|
153.1
|
1.0
|
|
CB
|
P:CYS168
|
2.8
|
136.0
|
1.0
|
|
FE2
|
P:FES301
|
3.0
|
175.1
|
1.0
|
|
CB
|
P:CYS187
|
3.1
|
158.7
|
1.0
|
|
OG
|
P:SER192
|
3.6
|
167.4
|
1.0
|
|
CB
|
P:HIS170
|
3.8
|
146.4
|
1.0
|
|
CA
|
P:CYS168
|
4.3
|
131.1
|
1.0
|
|
N
|
P:LEU171
|
4.4
|
161.2
|
1.0
|
|
ND1
|
P:HIS170
|
4.5
|
147.8
|
1.0
|
|
ND1
|
P:HIS190
|
4.5
|
180.4
|
1.0
|
|
N
|
P:HIS170
|
4.6
|
145.5
|
1.0
|
|
CA
|
P:CYS187
|
4.6
|
164.1
|
1.0
|
|
C
|
P:CYS168
|
4.6
|
130.8
|
1.0
|
|
CG
|
P:HIS170
|
4.6
|
147.3
|
1.0
|
|
CB
|
P:CYS173
|
4.6
|
176.3
|
1.0
|
|
N
|
P:CYS173
|
4.6
|
165.4
|
1.0
|
|
CA
|
P:HIS170
|
4.7
|
149.3
|
1.0
|
|
CB
|
P:CYS189
|
4.7
|
179.4
|
1.0
|
|
CB
|
P:SER192
|
4.8
|
167.0
|
1.0
|
|
N
|
P:GLY172
|
4.8
|
165.4
|
1.0
|
|
O
|
P:CYS168
|
4.9
|
128.3
|
1.0
|
|
O
|
P:CYS173
|
5.0
|
159.1
|
1.0
|
|
N
|
P:HIS190
|
5.0
|
177.3
|
1.0
|
|
Iron binding site 4 out
of 8 in 8abf
Go back to
Iron Binding Sites List in 8abf
Iron binding site 4 out
of 8 in the Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, Int-Position
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, Int-Position within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
P:Fe301
b:175.1
occ:1.00
|
FE2
|
P:FES301
|
0.0
|
175.1
|
1.0
|
|
ND1
|
P:HIS170
|
2.1
|
147.8
|
1.0
|
|
ND1
|
P:HIS190
|
2.1
|
180.4
|
1.0
|
|
S1
|
P:FES301
|
2.2
|
173.5
|
1.0
|
|
S2
|
P:FES301
|
2.2
|
172.4
|
1.0
|
|
CG
|
P:HIS190
|
2.8
|
180.0
|
1.0
|
|
CB
|
P:HIS190
|
3.0
|
180.2
|
1.0
|
|
CG
|
P:HIS170
|
3.0
|
147.3
|
1.0
|
|
FE1
|
P:FES301
|
3.0
|
170.4
|
1.0
|
|
CE1
|
P:HIS170
|
3.1
|
145.4
|
1.0
|
|
CE1
|
P:HIS190
|
3.1
|
181.8
|
1.0
|
|
CB
|
P:HIS170
|
3.3
|
146.4
|
1.0
|
|
N
|
P:HIS190
|
3.7
|
177.3
|
1.0
|
|
CD2
|
P:HIS190
|
3.9
|
180.5
|
1.0
|
|
CA
|
P:HIS190
|
3.9
|
178.5
|
1.0
|
|
NE2
|
P:HIS190
|
4.0
|
181.6
|
1.0
|
|
CD2
|
P:HIS170
|
4.1
|
148.9
|
1.0
|
|
NE2
|
P:HIS170
|
4.2
|
148.8
|
1.0
|
|
N
|
P:LEU171
|
4.2
|
161.2
|
1.0
|
|
CB
|
P:CYS189
|
4.3
|
179.4
|
1.0
|
|
SG
|
P:CYS187
|
4.4
|
153.1
|
1.0
|
|
CB
|
P:LEU171
|
4.5
|
174.8
|
1.0
|
|
CG
|
P:LEU171
|
4.5
|
178.9
|
1.0
|
|
C
|
P:CYS189
|
4.5
|
177.3
|
1.0
|
|
CA
|
P:HIS170
|
4.6
|
149.3
|
1.0
|
|
SG
|
P:CYS168
|
4.7
|
138.9
|
1.0
|
|
C
|
P:HIS190
|
4.7
|
178.3
|
1.0
|
|
CG
|
P:PRO204
|
4.7
|
162.7
|
1.0
|
|
C
|
P:HIS170
|
4.8
|
154.2
|
1.0
|
|
CD1
|
P:LEU171
|
4.8
|
179.1
|
1.0
|
|
CB
|
P:PRO204
|
5.0
|
164.8
|
1.0
|
|
CA
|
P:CYS189
|
5.0
|
176.2
|
1.0
|
|
Iron binding site 5 out
of 8 in 8abf
Go back to
Iron Binding Sites List in 8abf
Iron binding site 5 out
of 8 in the Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, Int-Position
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, Int-Position within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Fe401
b:35.0
occ:1.00
|
FE
|
D:HEC401
|
0.0
|
35.0
|
1.0
|
|
NE2
|
D:HIS128
|
2.0
|
30.4
|
1.0
|
|
NB
|
D:HEC401
|
2.0
|
35.3
|
1.0
|
|
NC
|
D:HEC401
|
2.0
|
36.9
|
1.0
|
|
ND
|
D:HEC401
|
2.1
|
35.8
|
1.0
|
|
NA
|
D:HEC401
|
2.1
|
35.5
|
1.0
|
|
SD
|
D:MET248
|
2.3
|
35.5
|
1.0
|
|
CE1
|
D:HIS128
|
3.0
|
30.7
|
1.0
|
|
C4B
|
D:HEC401
|
3.0
|
36.3
|
1.0
|
|
C4C
|
D:HEC401
|
3.0
|
37.4
|
1.0
|
|
C4D
|
D:HEC401
|
3.0
|
35.9
|
1.0
|
|
C1B
|
D:HEC401
|
3.0
|
35.5
|
1.0
|
|
C1C
|
D:HEC401
|
3.0
|
36.9
|
1.0
|
|
C1D
|
D:HEC401
|
3.1
|
36.5
|
1.0
|
|
C4A
|
D:HEC401
|
3.1
|
34.8
|
1.0
|
|
C1A
|
D:HEC401
|
3.1
|
36.2
|
1.0
|
|
CD2
|
D:HIS128
|
3.1
|
29.8
|
1.0
|
|
CE
|
D:MET248
|
3.3
|
34.5
|
1.0
|
|
CHA
|
D:HEC401
|
3.4
|
35.2
|
1.0
|
|
CHB
|
D:HEC401
|
3.4
|
34.4
|
1.0
|
|
CHC
|
D:HEC401
|
3.4
|
36.1
|
1.0
|
|
CHD
|
D:HEC401
|
3.4
|
37.4
|
1.0
|
|
CG
|
D:MET248
|
3.4
|
36.1
|
1.0
|
|
CB
|
D:MET248
|
4.1
|
37.4
|
1.0
|
|
ND1
|
D:HIS128
|
4.1
|
31.0
|
1.0
|
|
CG
|
D:HIS128
|
4.2
|
31.9
|
1.0
|
|
C3C
|
D:HEC401
|
4.3
|
39.0
|
1.0
|
|
C3B
|
D:HEC401
|
4.3
|
37.9
|
1.0
|
|
C3D
|
D:HEC401
|
4.3
|
37.3
|
1.0
|
|
C2D
|
D:HEC401
|
4.3
|
37.1
|
1.0
|
|
C2C
|
D:HEC401
|
4.3
|
37.6
|
1.0
|
|
C2B
|
D:HEC401
|
4.4
|
36.6
|
1.0
|
|
C3A
|
D:HEC401
|
4.4
|
35.6
|
1.0
|
|
C2A
|
D:HEC401
|
4.4
|
35.9
|
1.0
|
|
Iron binding site 6 out
of 8 in 8abf
Go back to
Iron Binding Sites List in 8abf
Iron binding site 6 out
of 8 in the Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, Int-Position
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, Int-Position within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
N:Fe501
b:25.2
occ:1.00
|
FE
|
N:HEM501
|
0.0
|
25.2
|
1.0
|
|
ND
|
N:HEM501
|
1.9
|
26.0
|
1.0
|
|
NA
|
N:HEM501
|
2.0
|
26.3
|
1.0
|
|
NE2
|
N:HIS82
|
2.0
|
25.3
|
1.0
|
|
NC
|
N:HEM501
|
2.1
|
26.0
|
1.0
|
|
NE2
|
N:HIS183
|
2.1
|
23.7
|
1.0
|
|
NB
|
N:HEM501
|
2.1
|
26.6
|
1.0
|
|
C1D
|
N:HEM501
|
2.9
|
25.5
|
1.0
|
|
C4D
|
N:HEM501
|
2.9
|
26.2
|
1.0
|
|
C1A
|
N:HEM501
|
2.9
|
26.4
|
1.0
|
|
CE1
|
N:HIS82
|
3.0
|
24.1
|
1.0
|
|
C4A
|
N:HEM501
|
3.0
|
26.3
|
1.0
|
|
CE1
|
N:HIS183
|
3.0
|
24.1
|
1.0
|
|
C4B
|
N:HEM501
|
3.0
|
26.7
|
1.0
|
|
C4C
|
N:HEM501
|
3.1
|
26.1
|
1.0
|
|
C1C
|
N:HEM501
|
3.1
|
27.1
|
1.0
|
|
CD2
|
N:HIS82
|
3.1
|
25.3
|
1.0
|
|
C1B
|
N:HEM501
|
3.1
|
26.1
|
1.0
|
|
CD2
|
N:HIS183
|
3.1
|
23.0
|
1.0
|
|
CHA
|
N:HEM501
|
3.4
|
25.7
|
1.0
|
|
CHD
|
N:HEM501
|
3.4
|
26.1
|
1.0
|
|
CHC
|
N:HEM501
|
3.5
|
26.8
|
1.0
|
|
CHB
|
N:HEM501
|
3.5
|
26.1
|
1.0
|
|
ND1
|
N:HIS82
|
4.1
|
23.6
|
1.0
|
|
ND1
|
N:HIS183
|
4.1
|
23.3
|
1.0
|
|
C2A
|
N:HEM501
|
4.2
|
27.4
|
1.0
|
|
CG
|
N:HIS82
|
4.2
|
25.7
|
1.0
|
|
C2D
|
N:HEM501
|
4.2
|
27.1
|
1.0
|
|
C3A
|
N:HEM501
|
4.2
|
26.8
|
1.0
|
|
C3D
|
N:HEM501
|
4.2
|
28.2
|
1.0
|
|
CG
|
N:HIS183
|
4.2
|
24.1
|
1.0
|
|
C2C
|
N:HEM501
|
4.3
|
28.1
|
1.0
|
|
C3C
|
N:HEM501
|
4.3
|
28.2
|
1.0
|
|
C3B
|
N:HEM501
|
4.3
|
27.5
|
1.0
|
|
C2B
|
N:HEM501
|
4.3
|
26.9
|
1.0
|
|
CA
|
N:GLY131
|
4.8
|
32.0
|
1.0
|
|
NE2
|
N:GLN43
|
4.8
|
26.6
|
1.0
|
|
Iron binding site 7 out
of 8 in 8abf
Go back to
Iron Binding Sites List in 8abf
Iron binding site 7 out
of 8 in the Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, Int-Position
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, Int-Position within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
N:Fe502
b:24.6
occ:1.00
|
FE
|
N:HEM502
|
0.0
|
24.6
|
1.0
|
|
ND
|
N:HEM502
|
1.9
|
25.1
|
1.0
|
|
NA
|
N:HEM502
|
2.0
|
25.3
|
1.0
|
|
NC
|
N:HEM502
|
2.0
|
24.5
|
1.0
|
|
NE2
|
N:HIS96
|
2.1
|
23.3
|
1.0
|
|
NB
|
N:HEM502
|
2.1
|
24.6
|
1.0
|
|
NE2
|
N:HIS197
|
2.1
|
22.6
|
1.0
|
|
C4D
|
N:HEM502
|
2.9
|
25.1
|
1.0
|
|
C1D
|
N:HEM502
|
2.9
|
25.2
|
1.0
|
|
C4C
|
N:HEM502
|
3.0
|
25.4
|
1.0
|
|
CE1
|
N:HIS96
|
3.0
|
23.6
|
1.0
|
|
C1A
|
N:HEM502
|
3.0
|
26.1
|
1.0
|
|
C4A
|
N:HEM502
|
3.0
|
25.6
|
1.0
|
|
CE1
|
N:HIS197
|
3.0
|
23.1
|
1.0
|
|
C1B
|
N:HEM502
|
3.1
|
24.7
|
1.0
|
|
C4B
|
N:HEM502
|
3.1
|
24.9
|
1.0
|
|
C1C
|
N:HEM502
|
3.1
|
24.8
|
1.0
|
|
CD2
|
N:HIS96
|
3.2
|
24.4
|
1.0
|
|
CD2
|
N:HIS197
|
3.2
|
22.9
|
1.0
|
|
CHA
|
N:HEM502
|
3.4
|
25.8
|
1.0
|
|
CHD
|
N:HEM502
|
3.4
|
25.4
|
1.0
|
|
CHB
|
N:HEM502
|
3.4
|
25.3
|
1.0
|
|
CHC
|
N:HEM502
|
3.5
|
24.9
|
1.0
|
|
ND1
|
N:HIS96
|
4.1
|
24.8
|
1.0
|
|
C3C
|
N:HEM502
|
4.1
|
25.6
|
1.0
|
|
C3D
|
N:HEM502
|
4.2
|
27.1
|
1.0
|
|
C2A
|
N:HEM502
|
4.2
|
27.6
|
1.0
|
|
C2D
|
N:HEM502
|
4.2
|
26.1
|
1.0
|
|
C3A
|
N:HEM502
|
4.2
|
27.2
|
1.0
|
|
ND1
|
N:HIS197
|
4.2
|
23.9
|
1.0
|
|
C2C
|
N:HEM502
|
4.2
|
25.2
|
1.0
|
|
CG
|
N:HIS96
|
4.2
|
25.4
|
1.0
|
|
CG
|
N:HIS197
|
4.3
|
24.6
|
1.0
|
|
C2B
|
N:HEM502
|
4.3
|
25.5
|
1.0
|
|
C3B
|
N:HEM502
|
4.3
|
25.4
|
1.0
|
|
Iron binding site 8 out
of 8 in 8abf
Go back to
Iron Binding Sites List in 8abf
Iron binding site 8 out
of 8 in the Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, Int-Position
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Complex III2 From Yarrowia Lipolytica, Oxidised with Ferricyanide, Int-Position within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
O:Fe401
b:35.0
occ:1.00
|
FE
|
O:HEC401
|
0.0
|
35.0
|
1.0
|
|
NE2
|
O:HIS128
|
2.0
|
32.6
|
1.0
|
|
NB
|
O:HEC401
|
2.0
|
36.0
|
1.0
|
|
NC
|
O:HEC401
|
2.1
|
37.1
|
1.0
|
|
ND
|
O:HEC401
|
2.1
|
36.0
|
1.0
|
|
NA
|
O:HEC401
|
2.1
|
35.4
|
1.0
|
|
SD
|
O:MET248
|
2.3
|
38.1
|
1.0
|
|
CE1
|
O:HIS128
|
3.0
|
32.2
|
1.0
|
|
C4B
|
O:HEC401
|
3.0
|
36.4
|
1.0
|
|
C4C
|
O:HEC401
|
3.0
|
37.2
|
1.0
|
|
CD2
|
O:HIS128
|
3.0
|
32.3
|
1.0
|
|
C1B
|
O:HEC401
|
3.0
|
35.0
|
1.0
|
|
C4D
|
O:HEC401
|
3.0
|
36.0
|
1.0
|
|
C1A
|
O:HEC401
|
3.0
|
35.6
|
1.0
|
|
C1C
|
O:HEC401
|
3.1
|
37.6
|
1.0
|
|
C4A
|
O:HEC401
|
3.1
|
35.0
|
1.0
|
|
C1D
|
O:HEC401
|
3.1
|
36.7
|
1.0
|
|
CE
|
O:MET248
|
3.4
|
37.9
|
1.0
|
|
CHA
|
O:HEC401
|
3.4
|
35.4
|
1.0
|
|
CHB
|
O:HEC401
|
3.4
|
35.0
|
1.0
|
|
CHC
|
O:HEC401
|
3.4
|
36.9
|
1.0
|
|
CHD
|
O:HEC401
|
3.4
|
36.0
|
1.0
|
|
CG
|
O:MET248
|
3.5
|
39.1
|
1.0
|
|
ND1
|
O:HIS128
|
4.1
|
32.6
|
1.0
|
|
CB
|
O:MET248
|
4.1
|
41.8
|
1.0
|
|
CG
|
O:HIS128
|
4.1
|
33.9
|
1.0
|
|
C3B
|
O:HEC401
|
4.2
|
37.1
|
1.0
|
|
C3C
|
O:HEC401
|
4.3
|
38.8
|
1.0
|
|
C2B
|
O:HEC401
|
4.3
|
36.0
|
1.0
|
|
C3D
|
O:HEC401
|
4.3
|
36.9
|
1.0
|
|
C2C
|
O:HEC401
|
4.4
|
38.1
|
1.0
|
|
C2D
|
O:HEC401
|
4.4
|
37.0
|
1.0
|
|
C2A
|
O:HEC401
|
4.4
|
35.8
|
1.0
|
|
C3A
|
O:HEC401
|
4.4
|
36.0
|
1.0
|
|
Reference:
J.P.Wieferig,
W.Kuhlbrandt.
Analysis of the Conformational Heterogeneity of the Rieske Iron-Sulfur Protein in Complex III2 By Cryo-Em Iucrj 2023.
ISSN: ESSN 2052-2525
Page generated: Thu Aug 7 12:47:11 2025
|