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Iron in PDB 8av5: Glycosylated Pada-I Mutant of Unspecific Peroxygenase From Agrocybe Aegerita

Enzymatic activity of Glycosylated Pada-I Mutant of Unspecific Peroxygenase From Agrocybe Aegerita

All present enzymatic activity of Glycosylated Pada-I Mutant of Unspecific Peroxygenase From Agrocybe Aegerita:
1.11.2.1;

Protein crystallography data

The structure of Glycosylated Pada-I Mutant of Unspecific Peroxygenase From Agrocybe Aegerita, PDB code: 8av5 was solved by T.F.Mielke, G.Grogan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 59.18 / 1.62
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 77.66, 77.66, 123.883, 90, 90, 120
R / Rfree (%) 18.2 / 21

Other elements in 8av5:

The structure of Glycosylated Pada-I Mutant of Unspecific Peroxygenase From Agrocybe Aegerita also contains other interesting chemical elements:

Chlorine (Cl) 1 atom
Magnesium (Mg) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Glycosylated Pada-I Mutant of Unspecific Peroxygenase From Agrocybe Aegerita (pdb code 8av5). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Glycosylated Pada-I Mutant of Unspecific Peroxygenase From Agrocybe Aegerita, PDB code: 8av5:

Iron binding site 1 out of 1 in 8av5

Go back to Iron Binding Sites List in 8av5
Iron binding site 1 out of 1 in the Glycosylated Pada-I Mutant of Unspecific Peroxygenase From Agrocybe Aegerita


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Glycosylated Pada-I Mutant of Unspecific Peroxygenase From Agrocybe Aegerita within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe404

b:5.6
occ:1.00
 FE A:HEM404 0.0 5.6 1.0
ND A:HEM404 1.9 5.9 1.0
NA A:HEM404 2.0 5.7 1.0
NC A:HEM404 2.1 5.9 1.0
NB A:HEM404 2.1 5.9 1.0
SG A:CYS36 2.4 22.4 1.0
OXT A:ACT405 2.7 46.5 1.0
C4D A:HEM404 2.9 5.9 1.0
C1D A:HEM404 2.9 5.9 1.0
C1A A:HEM404 3.0 5.7 1.0
C4C A:HEM404 3.0 6.0 1.0
C4A A:HEM404 3.0 5.7 1.0
C1B A:HEM404 3.1 6.0 1.0
C4B A:HEM404 3.1 6.2 1.0
C1C A:HEM404 3.1 6.1 1.0
CHA A:HEM404 3.3 5.8 1.0
CHD A:HEM404 3.4 6.0 1.0
CB A:CYS36 3.4 21.6 1.0
CHB A:HEM404 3.5 6.0 1.0
CHC A:HEM404 3.5 6.2 1.0
C A:ACT405 3.9 55.4 1.0
C2D A:HEM404 4.1 6.1 1.0
C2A A:HEM404 4.1 5.6 1.0
C3D A:HEM404 4.1 6.1 1.0
C3A A:HEM404 4.2 5.7 1.0
C3C A:HEM404 4.2 6.5 1.0
CA A:CYS36 4.3 22.0 1.0
C2C A:HEM404 4.3 6.3 1.0
C2B A:HEM404 4.3 6.2 1.0
C3B A:HEM404 4.3 6.4 1.0
CH3 A:ACT405 4.4 43.5 1.0
O A:ACT405 4.9 55.4 1.0
CE2 A:PHE199 5.0 27.9 1.0
C A:CYS36 5.0 20.8 1.0
CD2 A:PHE199 5.0 27.5 1.0

Reference:

T.F.Mielke, G.Grogan. Glycosylated Pada-I Mutant of Unspecific Peroxygenase From Agrocybe Aegerita To Be Published.
Page generated: Thu Aug 7 13:30:47 2025

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