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Iron in PDB 8bax: X-Ray Structure of the Ceue Homologue From Geobacillus Stearothermophilus - Azotochelin Complex.

Protein crystallography data

The structure of X-Ray Structure of the Ceue Homologue From Geobacillus Stearothermophilus - Azotochelin Complex., PDB code: 8bax was solved by E.V.Blagova, A.Miller, E.J.Dodson, R.Booth, A.K.Duhme-Klair, K.S.Wilson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 58.60 / 1.38
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 34.158, 66.652, 117.055, 90, 90, 90
R / Rfree (%) 21.4 / 26.2

Iron Binding Sites:

The binding sites of Iron atom in the X-Ray Structure of the Ceue Homologue From Geobacillus Stearothermophilus - Azotochelin Complex. (pdb code 8bax). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the X-Ray Structure of the Ceue Homologue From Geobacillus Stearothermophilus - Azotochelin Complex., PDB code: 8bax:

Iron binding site 1 out of 1 in 8bax

Go back to Iron Binding Sites List in 8bax
Iron binding site 1 out of 1 in the X-Ray Structure of the Ceue Homologue From Geobacillus Stearothermophilus - Azotochelin Complex.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of X-Ray Structure of the Ceue Homologue From Geobacillus Stearothermophilus - Azotochelin Complex. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe401

b:23.7
occ:1.00
HE2 A:HIS218 1.5 25.4 1.0
OH A:TYR279 2.0 30.1 1.0
OAG A:95B402 2.0 23.1 1.0
OAF A:95B402 2.0 22.5 1.0
OAH A:95B402 2.0 22.7 1.0
OAE A:95B402 2.0 22.0 1.0
HH12 A:ARG109 2.1 42.8 0.0
NE2 A:HIS218 2.2 27.2 1.0
H2 A:95B402 2.4 21.4 1.0
HH A:TYR279 2.4 26.7 1.0
H22 A:95B402 2.6 22.9 0.0
H1 A:95B402 2.7 20.2 0.0
H21 A:95B402 2.7 19.2 0.0
CAY A:95B402 2.8 21.8 1.0
CAX A:95B402 2.8 22.0 1.0
CAZ A:95B402 2.8 20.3 1.0
CBA A:95B402 2.9 19.8 1.0
NH1 A:ARG109 3.0 40.7 0.5
CZ A:TYR279 3.0 33.7 1.0
CE1 A:HIS218 3.2 26.5 1.0
HH22 A:ARG240 3.3 25.8 1.0
CD2 A:HIS218 3.3 25.5 1.0
HE1 A:HIS218 3.3 26.1 1.0
HH12 A:ARG195 3.4 22.7 0.0
HH22 A:ARG109 3.4 18.7 0.5
HE A:ARG109 3.4 20.8 0.5
HH11 A:ARG109 3.4 42.8 0.0
HE A:ARG240 3.5 25.5 1.0
HD2 A:HIS218 3.5 22.9 1.0
HH21 A:ARG109 3.5 26.0 0.5
HE2 A:TYR279 3.6 24.5 1.0
CE2 A:TYR279 3.7 27.4 1.0
HE3 A:MET89 3.7 32.0 1.0
H17 A:95B402 3.8 25.9 1.0
H6 A:95B402 3.8 26.2 1.0
CZ A:ARG109 3.9 33.3 0.5
CE1 A:TYR279 4.0 28.4 1.0
HE1 A:TYR279 4.0 25.5 1.0
NH2 A:ARG109 4.1 25.6 0.5
NH2 A:ARG240 4.1 23.0 1.0
CAL A:95B402 4.1 25.4 1.0
HH21 A:ARG195 4.2 21.6 1.0
NE A:ARG109 4.2 21.3 0.5
CAK A:95B402 4.2 23.5 1.0
CBB A:95B402 4.2 22.4 1.0
NH2 A:ARG109 4.2 19.5 0.5
NH1 A:ARG195 4.2 26.5 1.0
CBC A:95B402 4.2 25.6 1.0
HE1 A:MET89 4.2 32.0 1.0
NE A:ARG240 4.3 26.3 1.0
CE A:MET89 4.3 31.4 1.0
HE2 A:MET89 4.3 32.2 1.0
ND1 A:HIS218 4.3 27.8 1.0
H11 A:95B402 4.3 27.5 1.0
CG A:HIS218 4.4 25.9 1.0
H3 A:95B402 4.5 24.0 1.0
NAS A:95B402 4.6 27.0 1.0
H20 A:95B402 4.6 22.9 1.0
HB2 A:PRO217 4.6 24.8 1.0
N A:95B402 4.6 24.4 1.0
HG2 A:ARG109 4.6 20.4 0.5
CZ A:ARG109 4.7 18.8 0.5
CZ A:ARG240 4.7 29.4 1.0
HG2 A:ARG109 4.7 26.5 0.5
NH2 A:ARG195 4.7 25.4 1.0
HH21 A:ARG240 4.8 23.8 1.0
HH11 A:ARG195 4.8 22.7 0.0
HG21 A:VAL244 4.9 25.3 1.0
HH22 A:ARG109 4.9 25.7 0.5
HH21 A:ARG109 4.9 18.5 0.5
CAV A:95B402 4.9 30.3 1.0
CD2 A:TYR279 5.0 25.3 1.0
CZ A:ARG195 5.0 21.3 1.0
CAW A:95B402 5.0 28.5 1.0

Reference:

E.V.Blagova, A.Miller, M.Bennett, R.Booth, E.J.Dodson, A.-K.Duhme-Klair, K.S.Wilson. Thermostable Homologues of the Periplasmic Siderophore-Binding Protein Ceue From and Acta Crystallogr.,Sect.D 2023.
ISSN: ESSN 1399-0047
Page generated: Fri Aug 9 18:54:25 2024

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