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Iron in PDB 8dnp: Human Brain Ferritin Heavy Chain

Enzymatic activity of Human Brain Ferritin Heavy Chain

All present enzymatic activity of Human Brain Ferritin Heavy Chain:
1.16.3.1;

Iron Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 24;

Binding sites:

The binding sites of Iron atom in the Human Brain Ferritin Heavy Chain (pdb code 8dnp). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 24 binding sites of Iron where determined in the Human Brain Ferritin Heavy Chain, PDB code: 8dnp:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Iron binding site 1 out of 24 in 8dnp

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Iron binding site 1 out of 24 in the Human Brain Ferritin Heavy Chain


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Human Brain Ferritin Heavy Chain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:26.7
occ:1.00
 OE1 A:GLU28 1.8 0.9 1.0
ND1 A:HIS66 2.4 0.9 1.0
OE1 A:GLU63 2.4 0.9 1.0
CD A:GLU28 2.7 0.9 1.0
OE2 A:GLU28 3.0 0.9 1.0
CG A:HIS66 3.2 0.9 1.0
CE1 A:HIS66 3.3 0.9 1.0
CD A:GLU63 3.3 0.9 1.0
CB A:HIS66 3.4 0.9 1.0
NE2 A:GLN142 3.7 0.9 1.0
OE2 A:GLU63 3.7 0.9 1.0
CG A:GLU28 4.1 0.9 1.0
CD2 A:HIS66 4.2 0.9 1.0
NE2 A:HIS66 4.3 0.9 1.0
CG1 A:VAL111 4.3 0.9 1.0
CA A:GLU63 4.4 0.9 1.0
CB A:GLU28 4.5 0.9 1.0
CG A:GLU63 4.5 0.9 1.0
CB A:GLU63 4.6 0.9 1.0
O A:GLU63 4.8 0.9 1.0
CA A:HIS66 4.9 0.9 1.0
CD2 A:TYR138 4.9 0.8 1.0
CD A:GLN142 4.9 0.9 1.0
CE2 A:TYR138 4.9 0.8 1.0

Iron binding site 2 out of 24 in 8dnp

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Iron binding site 2 out of 24 in the Human Brain Ferritin Heavy Chain


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Human Brain Ferritin Heavy Chain within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe201

b:23.8
occ:1.00
 OE1 B:GLU28 1.8 0.9 1.0
ND1 B:HIS66 2.4 0.9 1.0
OE1 B:GLU63 2.4 0.9 1.0
CD B:GLU28 2.7 0.9 1.0
OE2 B:GLU28 3.0 0.9 1.0
CG B:HIS66 3.1 0.9 1.0
CE1 B:HIS66 3.3 0.9 1.0
CD B:GLU63 3.3 0.9 1.0
CB B:HIS66 3.4 0.9 1.0
NE2 B:GLN142 3.7 0.9 1.0
OE2 B:GLU63 3.7 0.9 1.0
CG B:GLU28 4.1 0.9 1.0
CD2 B:HIS66 4.2 0.9 1.0
NE2 B:HIS66 4.3 0.9 1.0
CG1 B:VAL111 4.4 0.9 1.0
CA B:GLU63 4.4 0.9 1.0
CB B:GLU28 4.5 0.9 1.0
CG B:GLU63 4.5 0.9 1.0
CB B:GLU63 4.6 0.9 1.0
O B:GLU63 4.8 0.9 1.0
CA B:HIS66 4.9 0.9 1.0
CD2 B:TYR138 4.9 0.8 1.0
CD B:GLN142 4.9 0.9 1.0
CE2 B:TYR138 4.9 0.8 1.0

Iron binding site 3 out of 24 in 8dnp

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Iron binding site 3 out of 24 in the Human Brain Ferritin Heavy Chain


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Human Brain Ferritin Heavy Chain within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe201

b:24.3
occ:1.00
 OE1 C:GLU28 2.0 0.9 1.0
OE1 C:GLU63 2.0 0.9 1.0
ND1 C:HIS66 2.3 0.9 1.0
CD C:GLU63 2.9 0.9 1.0
CD C:GLU28 3.0 0.9 1.0
CE1 C:HIS66 3.1 0.9 1.0
CG C:HIS66 3.2 0.9 1.0
OE2 C:GLU63 3.3 0.9 1.0
OE2 C:GLU28 3.4 0.9 1.0
CB C:HIS66 3.6 0.9 1.0
NE2 C:GLN142 3.6 0.9 1.0
CA C:GLU63 4.1 0.9 1.0
CG C:GLU63 4.1 0.9 1.0
NE2 C:HIS66 4.2 0.9 1.0
CB C:GLU63 4.3 0.9 1.0
CD2 C:HIS66 4.3 0.9 1.0
CG C:GLU28 4.4 0.9 1.0
CG1 C:VAL111 4.5 0.9 1.0
CB C:GLU28 4.7 0.9 1.0
O C:GLU63 4.7 0.9 1.0
OE1 C:GLU108 4.9 0.9 1.0
CD C:GLN142 4.9 0.9 1.0
C C:GLU63 4.9 0.9 1.0
N C:GLU63 5.0 0.9 1.0

Iron binding site 4 out of 24 in 8dnp

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Iron binding site 4 out of 24 in the Human Brain Ferritin Heavy Chain


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Human Brain Ferritin Heavy Chain within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Fe201

b:25.6
occ:1.00
 OE1 D:GLU28 2.0 0.9 1.0
OE1 D:GLU63 2.2 0.9 1.0
ND1 D:HIS66 2.4 0.9 1.0
CD D:GLU28 2.9 0.9 1.0
CD D:GLU63 3.1 0.9 1.0
OE2 D:GLU28 3.2 0.9 1.0
CE1 D:HIS66 3.2 0.9 1.0
CG D:HIS66 3.3 0.9 1.0
OE2 D:GLU63 3.4 0.9 1.0
NE2 D:GLN142 3.5 0.9 1.0
CB D:HIS66 3.6 0.9 1.0
CA D:GLU63 4.3 0.9 1.0
NE2 D:HIS66 4.3 0.9 1.0
CG D:GLU63 4.3 0.9 1.0
CG D:GLU28 4.3 0.9 1.0
CD2 D:HIS66 4.3 0.9 1.0
CG1 D:VAL111 4.4 0.9 1.0
CB D:GLU63 4.4 0.9 1.0
CB D:GLU28 4.7 0.9 1.0
CD D:GLN142 4.8 0.9 1.0
O D:GLU63 4.8 0.9 1.0
OE1 D:GLU108 4.9 0.9 1.0

Iron binding site 5 out of 24 in 8dnp

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Iron binding site 5 out of 24 in the Human Brain Ferritin Heavy Chain


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of Human Brain Ferritin Heavy Chain within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Fe201

b:25.4
occ:1.00
 OE1 E:GLU28 2.1 0.9 1.0
OE1 E:GLU63 2.1 0.9 1.0
ND1 E:HIS66 2.3 0.9 1.0
CD E:GLU63 3.0 0.9 1.0
CD E:GLU28 3.1 0.9 1.0
CE1 E:HIS66 3.1 0.9 1.0
CG E:HIS66 3.2 0.9 1.0
OE2 E:GLU63 3.3 0.9 1.0
OE2 E:GLU28 3.4 0.9 1.0
NE2 E:GLN142 3.5 0.9 1.0
CB E:HIS66 3.6 0.9 1.0
NE2 E:HIS66 4.2 0.9 1.0
CA E:GLU63 4.2 0.9 1.0
CG E:GLU63 4.2 0.9 1.0
CD2 E:HIS66 4.3 0.9 1.0
CB E:GLU63 4.4 0.9 1.0
CG E:GLU28 4.4 0.9 1.0
CG1 E:VAL111 4.5 0.9 1.0
CB E:GLU28 4.8 0.9 1.0
CD E:GLN142 4.8 0.9 1.0
O E:GLU63 4.8 0.9 1.0
OE1 E:GLU108 4.8 0.9 1.0

Iron binding site 6 out of 24 in 8dnp

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Iron binding site 6 out of 24 in the Human Brain Ferritin Heavy Chain


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of Human Brain Ferritin Heavy Chain within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Fe201

b:24.0
occ:1.00
 OE1 F:GLU28 2.0 0.9 1.0
OE1 F:GLU63 2.2 0.9 1.0
ND1 F:HIS66 2.3 0.9 1.0
CD F:GLU28 3.0 0.9 1.0
CD F:GLU63 3.0 0.9 1.0
CE1 F:HIS66 3.2 0.9 1.0
CG F:HIS66 3.2 0.9 1.0
OE2 F:GLU28 3.3 0.9 1.0
OE2 F:GLU63 3.4 0.9 1.0
NE2 F:GLN142 3.6 0.9 1.0
CB F:HIS66 3.6 0.9 1.0
NE2 F:HIS66 4.2 0.9 1.0
CA F:GLU63 4.3 0.9 1.0
CD2 F:HIS66 4.3 0.9 1.0
CG F:GLU63 4.3 0.9 1.0
CG F:GLU28 4.3 0.9 1.0
CB F:GLU63 4.4 0.9 1.0
CG1 F:VAL111 4.4 0.9 1.0
CB F:GLU28 4.7 0.9 1.0
O F:GLU63 4.8 0.9 1.0
CD F:GLN142 4.8 0.9 1.0
OE1 F:GLU108 4.9 0.9 1.0

Iron binding site 7 out of 24 in 8dnp

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Iron binding site 7 out of 24 in the Human Brain Ferritin Heavy Chain


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 7 of Human Brain Ferritin Heavy Chain within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Fe201

b:26.7
occ:1.00
 OE1 G:GLU28 2.0 0.9 1.0
OE1 G:GLU63 2.1 0.9 1.0
ND1 G:HIS66 2.3 0.9 1.0
CD G:GLU28 3.0 0.9 1.0
CD G:GLU63 3.0 0.9 1.0
CE1 G:HIS66 3.2 0.9 1.0
CG G:HIS66 3.2 0.9 1.0
OE2 G:GLU28 3.3 0.9 1.0
OE2 G:GLU63 3.4 0.9 1.0
NE2 G:GLN142 3.6 0.9 1.0
CB G:HIS66 3.6 0.9 1.0
CA G:GLU63 4.2 0.9 1.0
CG G:GLU63 4.2 0.9 1.0
NE2 G:HIS66 4.2 0.9 1.0
CD2 G:HIS66 4.3 0.9 1.0
CG G:GLU28 4.4 0.9 1.0
CB G:GLU63 4.4 0.9 1.0
CG1 G:VAL111 4.5 0.9 1.0
CB G:GLU28 4.7 0.9 1.0
O G:GLU63 4.8 0.9 1.0
CD G:GLN142 4.9 0.9 1.0
OE1 G:GLU108 4.9 0.9 1.0

Iron binding site 8 out of 24 in 8dnp

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Iron binding site 8 out of 24 in the Human Brain Ferritin Heavy Chain


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 8 of Human Brain Ferritin Heavy Chain within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Fe201

b:23.8
occ:1.00
 OE1 H:GLU28 2.0 0.9 1.0
OE1 H:GLU63 2.1 0.9 1.0
ND1 H:HIS66 2.4 0.9 1.0
CD H:GLU28 3.0 0.9 1.0
CD H:GLU63 3.0 0.9 1.0
CE1 H:HIS66 3.2 0.9 1.0
CG H:HIS66 3.3 0.9 1.0
OE2 H:GLU28 3.3 0.9 1.0
OE2 H:GLU63 3.4 0.9 1.0
NE2 H:GLN142 3.6 0.9 1.0
CB H:HIS66 3.6 0.9 1.0
CA H:GLU63 4.2 0.9 1.0
CG H:GLU63 4.2 0.9 1.0
NE2 H:HIS66 4.3 0.9 1.0
CD2 H:HIS66 4.3 0.9 1.0
CG H:GLU28 4.3 0.9 1.0
CB H:GLU63 4.4 0.9 1.0
CG1 H:VAL111 4.4 0.9 1.0
CB H:GLU28 4.7 0.9 1.0
O H:GLU63 4.8 0.9 1.0
CD H:GLN142 4.9 0.9 1.0
OE1 H:GLU108 4.9 0.9 1.0

Iron binding site 9 out of 24 in 8dnp

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Iron binding site 9 out of 24 in the Human Brain Ferritin Heavy Chain


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 9 of Human Brain Ferritin Heavy Chain within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Fe201

b:24.3
occ:1.00
 OE1 I:GLU28 2.0 0.9 1.0
OE1 I:GLU63 2.1 0.9 1.0
ND1 I:HIS66 2.4 0.9 1.0
CD I:GLU63 3.0 0.9 1.0
CD I:GLU28 3.0 0.9 1.0
CE1 I:HIS66 3.2 0.9 1.0
CG I:HIS66 3.3 0.9 1.0
OE2 I:GLU28 3.3 0.9 1.0
OE2 I:GLU63 3.3 0.9 1.0
NE2 I:GLN142 3.6 0.9 1.0
CB I:HIS66 3.6 0.9 1.0
CG I:GLU63 4.2 0.9 1.0
CA I:GLU63 4.2 0.9 1.0
NE2 I:HIS66 4.3 0.9 1.0
CG I:GLU28 4.3 0.9 1.0
CB I:GLU63 4.4 0.9 1.0
CD2 I:HIS66 4.4 0.9 1.0
CG1 I:VAL111 4.4 0.9 1.0
CB I:GLU28 4.7 0.9 1.0
O I:GLU63 4.8 0.9 1.0
CD I:GLN142 4.8 0.9 1.0
OE1 I:GLU108 4.9 0.9 1.0

Iron binding site 10 out of 24 in 8dnp

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Iron binding site 10 out of 24 in the Human Brain Ferritin Heavy Chain


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 10 of Human Brain Ferritin Heavy Chain within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Fe201

b:25.6
occ:1.00
 OE1 J:GLU28 2.0 0.9 1.0
OE1 J:GLU63 2.2 0.9 1.0
ND1 J:HIS66 2.4 0.9 1.0
CD J:GLU28 2.9 0.9 1.0
CD J:GLU63 3.1 0.9 1.0
OE2 J:GLU28 3.2 0.9 1.0
CE1 J:HIS66 3.2 0.9 1.0
CG J:HIS66 3.3 0.9 1.0
OE2 J:GLU63 3.4 0.9 1.0
NE2 J:GLN142 3.5 0.9 1.0
CB J:HIS66 3.6 0.9 1.0
CA J:GLU63 4.3 0.9 1.0
NE2 J:HIS66 4.3 0.9 1.0
CG J:GLU63 4.3 0.9 1.0
CG J:GLU28 4.3 0.9 1.0
CD2 J:HIS66 4.3 0.9 1.0
CG1 J:VAL111 4.4 0.9 1.0
CB J:GLU63 4.4 0.9 1.0
CB J:GLU28 4.7 0.9 1.0
CD J:GLN142 4.8 0.9 1.0
O J:GLU63 4.8 0.9 1.0
OE1 J:GLU108 4.9 0.9 1.0

Reference:

M.L.Tringides, M.L.Tringides. N/A N/A.
Page generated: Sat Aug 10 00:12:51 2024

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