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Iron in PDB 8fz8: Structure of Cytochrome P450SKY2

Protein crystallography data

The structure of Structure of Cytochrome P450SKY2, PDB code: 8fz8 was solved by V.C.Murarka, T.L.Poulos, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.84 / 1.43
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 35.98, 97.85, 52.5, 90, 95.12, 90
R / Rfree (%) 16.3 / 18.3

Iron Binding Sites:

The binding sites of Iron atom in the Structure of Cytochrome P450SKY2 (pdb code 8fz8). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Structure of Cytochrome P450SKY2, PDB code: 8fz8:

Iron binding site 1 out of 1 in 8fz8

Go back to Iron Binding Sites List in 8fz8
Iron binding site 1 out of 1 in the Structure of Cytochrome P450SKY2


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of Cytochrome P450SKY2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe501

b:11.1
occ:1.00
FE A:HEM501 0.0 11.1 1.0
NC A:HEM501 2.0 8.2 1.0
NA A:HEM501 2.0 9.0 1.0
ND A:HEM501 2.0 11.5 1.0
NB A:HEM501 2.1 11.4 1.0
O A:HOH601 2.3 21.1 1.0
SG A:CYS354 2.5 12.4 1.0
C4A A:HEM501 3.0 11.5 1.0
C1D A:HEM501 3.0 11.0 1.0
C4C A:HEM501 3.0 9.4 1.0
C1C A:HEM501 3.1 10.3 1.0
C4D A:HEM501 3.1 10.3 1.0
C1B A:HEM501 3.1 9.8 1.0
C1A A:HEM501 3.1 9.6 1.0
C4B A:HEM501 3.1 10.2 1.0
CHD A:HEM501 3.4 9.4 1.0
CHB A:HEM501 3.4 11.8 1.0
CHC A:HEM501 3.4 9.7 1.0
CB A:CYS354 3.4 11.2 1.0
CHA A:HEM501 3.5 9.0 1.0
O A:GLY242 4.0 16.1 1.0
CA A:CYS354 4.0 10.3 1.0
O2 A:OCA502 4.1 40.9 1.0
C3A A:HEM501 4.3 13.3 1.0
C2D A:HEM501 4.3 10.8 1.0
C3D A:HEM501 4.3 11.4 1.0
C3C A:HEM501 4.3 11.8 1.0
C2C A:HEM501 4.3 11.4 1.0
C2A A:HEM501 4.3 11.2 1.0
C2B A:HEM501 4.3 12.3 1.0
C3B A:HEM501 4.3 11.4 1.0
C1 A:OCA502 4.6 36.8 1.0
C2 A:OCA502 4.7 29.8 1.0
N A:GLY356 4.7 10.0 1.0
C A:GLY242 4.7 15.7 1.0
C A:CYS354 4.7 13.0 1.0
N A:ILE355 4.8 11.7 1.0

Reference:

V.C.Murarka, J.A.Amaya, T.L.Poulos. Biosynthesis of A New Skyllamycin Analogue in Streptomyces Nodosus: Structure of A Cytochrome P450 That Forms An Epoxide in the Cinnamoyl Chain To Be Published.
Page generated: Thu Aug 7 17:29:02 2025

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