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Iron in PDB 8glo: Haemophilus Parainfluenzae Holo Hpha

Protein crystallography data

The structure of Haemophilus Parainfluenzae Holo Hpha, PDB code: 8glo was solved by H.E.Shin, D.Ng, T.F.Moraes, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.30 / 1.94
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 49.402, 50.313, 125.899, 90, 90, 90
R / Rfree (%) 18.3 / 23.3

Other elements in 8glo:

The structure of Haemophilus Parainfluenzae Holo Hpha also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Haemophilus Parainfluenzae Holo Hpha (pdb code 8glo). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Haemophilus Parainfluenzae Holo Hpha, PDB code: 8glo:

Iron binding site 1 out of 1 in 8glo

Go back to Iron Binding Sites List in 8glo
Iron binding site 1 out of 1 in the Haemophilus Parainfluenzae Holo Hpha


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Haemophilus Parainfluenzae Holo Hpha within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe301

b:35.8
occ:1.00
FE A:HEB301 0.0 35.8 1.0
NB A:HEB301 2.1 31.3 1.0
ND A:HEB301 2.1 39.4 1.0
NC A:HEB301 2.1 34.4 1.0
NA A:HEB301 2.1 33.2 1.0
NE2 A:HIS101 2.3 33.0 1.0
CL A:CL302 2.7 65.8 1.0
C4B A:HEB301 3.1 27.9 1.0
C1B A:HEB301 3.1 34.1 1.0
C1D A:HEB301 3.1 39.0 1.0
C4A A:HEB301 3.1 33.0 1.0
C4C A:HEB301 3.1 33.4 1.0
C4D A:HEB301 3.1 34.4 1.0
C1A A:HEB301 3.1 35.4 1.0
CD2 A:HIS101 3.1 31.4 1.0
C1C A:HEB301 3.1 34.9 1.0
HD2 A:HIS101 3.2 37.6 1.0
CE1 A:HIS101 3.4 30.5 1.0
CHB A:HEB301 3.4 28.4 1.0
CHC A:HEB301 3.5 29.1 1.0
CHD A:HEB301 3.5 30.0 1.0
CHA A:HEB301 3.5 33.2 1.0
HE1 A:HIS101 3.6 36.6 1.0
HE21 A:GLN56 3.6 43.2 1.0
HH11 A:ARG64 3.7 45.0 1.0
HG2 A:GLN56 4.0 38.8 1.0
HE3 A:MET98 4.0 38.5 1.0
CG A:HIS101 4.3 33.1 1.0
NH1 A:ARG64 4.4 37.5 1.0
NE2 A:GLN56 4.4 36.0 1.0
C2D A:HEB301 4.4 34.7 1.0
ND1 A:HIS101 4.4 32.1 1.0
C3D A:HEB301 4.4 35.0 1.0
C3B A:HEB301 4.4 34.2 1.0
C3A A:HEB301 4.4 35.2 1.0
C3C A:HEB301 4.4 35.3 1.0
C2A A:HEB301 4.4 37.9 1.0
C2B A:HEB301 4.4 33.0 1.0
HH12 A:ARG64 4.4 45.0 1.0
C2C A:HEB301 4.5 33.5 1.0
HD3 A:ARG64 4.5 46.0 1.0
HHB A:HEB301 4.5 34.1 1.0
HHC A:HEB301 4.5 35.0 1.0
HHD A:HEB301 4.5 36.0 1.0
HHA A:HEB301 4.5 39.8 1.0
HG2 A:MET61 4.6 44.2 1.0
HD2 A:ARG64 4.8 46.0 1.0
HE22 A:GLN56 4.8 43.2 1.0
CG A:GLN56 4.9 32.4 1.0
HB1 A:ALA51 4.9 34.3 1.0
HG3 A:MET98 4.9 41.4 1.0
CE A:MET98 5.0 32.1 1.0
HA A:MET61 5.0 40.3 1.0

Reference:

H.E.Shin, T.F.Moraes. Heme Acquisition By Slam-Dependent Hemophores in Gram-Negative Bacteria To Be Published.
Page generated: Sat Aug 10 04:51:07 2024

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