Iron in PDB 8ito: Crystal Structure of Ferlp From Desulfovibrio Vulgaris (Hildenborough)

The structure of Crystal Structure of Ferlp From Desulfovibrio Vulgaris (Hildenborough), PDB code: 8ito was solved by T.Nakatsuji, H.Ogata, M.Kitamura, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	18.68 / 2.10
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	36.565, 57.856, 59.198, 90, 90, 90
R / Rfree (%)	18.5 / 24.4

The binding sites of Iron atom in the Crystal Structure of Ferlp From Desulfovibrio Vulgaris (Hildenborough) (pdb code 8ito). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure of Ferlp From Desulfovibrio Vulgaris (Hildenborough), PDB code: 8ito:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the Crystal Structure of Ferlp From Desulfovibrio Vulgaris (Hildenborough)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Ferlp From Desulfovibrio Vulgaris (Hildenborough) within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe102 b:23.3 occ:1.00 SG A:CYS48 2.2 27.1 1.0 SG A:CYS45 2.4 23.1 1.0 SG A:CYS10 2.4 26.3 1.0 SG A:CYS15 2.4 25.2 1.0 CB A:CYS10 3.1 25.6 1.0 CB A:CYS15 3.2 22.8 1.0 CB A:CYS45 3.2 23.6 1.0 CB A:CYS48 3.3 24.6 1.0 N A:CYS48 3.6 22.3 1.0 CA A:CYS48 4.0 23.5 1.0 OG1 A:THR12 4.2 28.2 1.0 CB A:ILE47 4.5 22.9 1.0 CA A:CYS10 4.6 26.6 1.0 C A:CYS48 4.6 28.5 1.0 CB A:TYR17 4.6 20.4 1.0 CA A:CYS15 4.6 25.8 1.0 CG2 A:THR12 4.7 33.6 1.0 CB A:ALA50 4.7 32.0 1.0 CA A:CYS45 4.7 25.1 1.0 CZ A:PHE55 4.7 23.1 1.0 C A:ILE47 4.8 24.4 1.0 N A:LYS49 4.8 28.6 1.0 N A:GLY16 4.8 26.0 1.0 N A:ALA50 4.9 23.8 1.0 N A:TYR17 5.0 19.7 1.0

Iron binding site 2 out of 2 in the Crystal Structure of Ferlp From Desulfovibrio Vulgaris (Hildenborough)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of Ferlp From Desulfovibrio Vulgaris (Hildenborough) within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe102 b:23.2 occ:1.00 SG B:CYS15 2.3 24.8 1.0 SG B:CYS48 2.3 26.0 1.0 SG B:CYS10 2.3 27.0 1.0 SG B:CYS45 2.4 25.5 1.0 CB B:CYS15 3.2 28.3 1.0 CB B:CYS10 3.2 21.6 1.0 CB B:CYS45 3.2 24.6 1.0 CB B:CYS48 3.3 22.7 1.0 N B:CYS48 3.8 27.4 1.0 CA B:CYS48 4.1 25.6 1.0 CB B:THR12 4.4 31.2 1.0 CB B:ALA50 4.5 20.7 1.0 CB B:TYR17 4.5 18.6 1.0 CA B:CYS10 4.6 25.7 1.0 CB B:ILE47 4.6 22.2 1.0 CA B:CYS15 4.6 27.0 1.0 CA B:CYS45 4.7 26.2 1.0 N B:GLY16 4.7 24.7 1.0 OG1 B:THR12 4.7 36.0 1.0 C B:CYS48 4.8 24.0 1.0 C B:ILE47 4.9 27.3 1.0 N B:TYR17 4.9 21.7 1.0 CZ B:PHE55 5.0 25.6 1.0 N B:ALA50 5.0 24.9 1.0

T.Nakatsuji, K.Nishikawa, H.Ogata, M.Kitamura. Crystal Structure of Ferlp From Desulfovibrio Vulgaris (Hildenborough) To Be Published.