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Iron in PDB 8k17: Human Collagen Prolyl Processing Enzyme Complex, P3H1/Crtap/Ppib Heterotrimer, Bound to Collagen Alpha-1(I) Chain

Enzymatic activity of Human Collagen Prolyl Processing Enzyme Complex, P3H1/Crtap/Ppib Heterotrimer, Bound to Collagen Alpha-1(I) Chain

All present enzymatic activity of Human Collagen Prolyl Processing Enzyme Complex, P3H1/Crtap/Ppib Heterotrimer, Bound to Collagen Alpha-1(I) Chain:
1.14.11.7; 5.2.1.8;

Iron Binding Sites:

The binding sites of Iron atom in the Human Collagen Prolyl Processing Enzyme Complex, P3H1/Crtap/Ppib Heterotrimer, Bound to Collagen Alpha-1(I) Chain (pdb code 8k17). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Human Collagen Prolyl Processing Enzyme Complex, P3H1/Crtap/Ppib Heterotrimer, Bound to Collagen Alpha-1(I) Chain, PDB code: 8k17:

Iron binding site 1 out of 1 in 8k17

Go back to Iron Binding Sites List in 8k17
Iron binding site 1 out of 1 in the Human Collagen Prolyl Processing Enzyme Complex, P3H1/Crtap/Ppib Heterotrimer, Bound to Collagen Alpha-1(I) Chain


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Human Collagen Prolyl Processing Enzyme Complex, P3H1/Crtap/Ppib Heterotrimer, Bound to Collagen Alpha-1(I) Chain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe803

b:87.2
occ:1.00
OD1 A:ASP589 2.0 57.6 1.0
CE1 A:HIS659 2.1 49.1 1.0
NE2 A:HIS659 2.4 46.2 1.0
NE2 A:HIS587 2.7 63.8 1.0
CG A:ASP589 2.9 55.8 1.0
OD2 A:ASP589 3.2 60.3 1.0
CE1 A:HIS587 3.4 62.6 1.0
ND1 A:HIS659 3.4 46.3 1.0
CD2 A:HIS587 3.5 61.2 1.0
CD2 A:HIS659 3.7 41.1 1.0
CG A:HIS659 4.2 44.5 1.0
CB A:ASP589 4.3 53.4 1.0
ND1 A:HIS587 4.4 64.1 1.0
CG A:HIS587 4.4 60.6 1.0
CA A:ASP589 4.8 55.7 1.0
N A:ASP589 4.8 52.8 1.0

Reference:

W.Li, J.Peng, D.Yao, B.Rao, Y.Xia, Q.Wang, S.Li, M.Cao, Y.Shen, P.Ma, R.Liao, A.Qin, J.Zhao, Y.Cao. The Structural Basis For the Collagen Processing By Human P3H1/Crtap/Ppib Ternary Complex. Nat Commun V. 15 7844 2024.
ISSN: ESSN 2041-1723
PubMed: 39245686
DOI: 10.1038/S41467-024-52321-6
Page generated: Thu Aug 7 18:51:01 2025

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