Atomistry » Iron » PDB 8k6j-8ovd » 8on2
Atomistry »
  Iron »
    PDB 8k6j-8ovd »
      8on2 »

Iron in PDB 8on2: Ni,Fe-Codh -600MV State : 24 H Dioxygen Exposure

Enzymatic activity of Ni,Fe-Codh -600MV State : 24 H Dioxygen Exposure

All present enzymatic activity of Ni,Fe-Codh -600MV State : 24 H Dioxygen Exposure:
1.2.7.4;

Protein crystallography data

The structure of Ni,Fe-Codh -600MV State : 24 H Dioxygen Exposure, PDB code: 8on2 was solved by Y.Basak, J.-H.Jeoung, H.Dobbek, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.96 / 1.58
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 111.91, 75.29, 70.83, 90, 111.24, 90
R / Rfree (%) 16.4 / 18.4

Iron Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 12;

Binding sites:

The binding sites of Iron atom in the Ni,Fe-Codh -600MV State : 24 H Dioxygen Exposure (pdb code 8on2). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 12 binding sites of Iron where determined in the Ni,Fe-Codh -600MV State : 24 H Dioxygen Exposure, PDB code: 8on2:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Iron binding site 1 out of 12 in 8on2

Go back to Iron Binding Sites List in 8on2
Iron binding site 1 out of 12 in the Ni,Fe-Codh -600MV State : 24 H Dioxygen Exposure


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Ni,Fe-Codh -600MV State : 24 H Dioxygen Exposure within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Fe1001

b:21.2
occ:1.00
FE1 X:SF41001 0.0 21.2 1.0
S2 X:SF41001 2.2 22.1 1.0
S4 X:SF41001 2.3 19.6 1.0
S3 X:SF41001 2.3 20.7 1.0
SG X:CYS56 2.4 37.9 1.0
FE2 X:SF41001 2.6 20.4 1.0
FE3 X:SF41001 2.7 21.7 1.0
FE4 X:SF41001 2.7 22.2 1.0
HB2 X:CYS56 2.9 28.5 1.0
CB X:CYS56 3.2 39.0 1.0
H X:ILE69 3.3 25.9 1.0
HB X:ILE69 3.6 25.4 1.0
HB3 X:CYS56 3.7 28.5 1.0
S1 X:SF41001 3.8 20.9 1.0
H X:CYS70 3.9 23.1 1.0
HB3 X:CYS48 4.0 23.2 1.0
N X:ILE69 4.0 21.4 1.0
HA2 X:GLY54 4.0 29.7 1.0
HA3 X:GLY54 4.1 29.7 1.0
H X:CYS56 4.2 26.1 1.0
HA3 X:GLY68 4.2 26.4 1.0
CA X:CYS56 4.4 38.6 1.0
HD13 X:ILE69 4.4 30.8 1.0
CA X:GLY54 4.4 24.7 1.0
N X:CYS56 4.4 36.7 1.0
HB2 X:GLN53 4.5 31.9 1.0
HA2 X:GLY68 4.5 26.4 1.0
CB X:ILE69 4.5 21.1 1.0
N X:GLY54 4.5 23.1 1.0
H X:GLY54 4.6 27.8 1.0
SG X:CYS51 4.6 23.6 1.0
SG X:CYS48 4.6 21.0 1.0
O X:CYS48 4.7 23.7 1.0
CA X:GLY68 4.7 21.9 1.0
N X:CYS70 4.7 19.9 1.0
CB X:CYS48 4.7 19.2 1.0
HG13 X:ILE69 4.8 27.1 1.0
SG X:CYS70 4.8 21.1 1.0
HA X:CYS56 4.8 27.9 1.0
C X:GLY68 4.8 24.3 1.0
CA X:ILE69 4.8 20.6 1.0
HE21 X:GLN53 5.0 28.5 1.0
H X:CYS51 5.0 24.2 1.0

Iron binding site 2 out of 12 in 8on2

Go back to Iron Binding Sites List in 8on2
Iron binding site 2 out of 12 in the Ni,Fe-Codh -600MV State : 24 H Dioxygen Exposure


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Ni,Fe-Codh -600MV State : 24 H Dioxygen Exposure within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Fe1001

b:20.4
occ:1.00
FE2 X:SF41001 0.0 20.4 1.0
S4 X:SF41001 2.2 19.6 1.0
S1 X:SF41001 2.3 20.9 1.0
S3 X:SF41001 2.3 20.7 1.0
SG X:CYS48 2.4 21.0 1.0
FE1 X:SF41001 2.6 21.2 1.0
FE4 X:SF41001 2.7 22.2 1.0
FE3 X:SF41001 2.7 21.7 1.0
HB3 X:CYS48 3.0 23.2 1.0
CB X:CYS48 3.3 19.2 1.0
HH22 X:ARG80 3.3 24.9 1.0
H X:HIS50 3.3 26.4 1.0
HB2 X:HIS50 3.5 26.5 1.0
HH21 X:ARG80 3.7 24.9 1.0
NH2 X:ARG80 3.7 21.3 1.0
S2 X:SF41001 3.8 22.1 1.0
HB2 X:CYS56 3.9 28.5 1.0
HB2 X:CYS48 3.9 23.2 1.0
H X:CYS51 4.0 24.2 1.0
N X:HIS50 4.0 22.4 1.0
C X:CYS48 4.2 21.9 1.0
O X:CYS48 4.3 23.7 1.0
CB X:HIS50 4.3 22.2 1.0
CA X:CYS48 4.4 21.2 1.0
N X:CYS51 4.5 19.8 1.0
CA X:HIS50 4.6 22.7 1.0
N X:ARG49 4.6 21.9 1.0
HG12 X:ILE77 4.7 27.3 1.0
CB X:CYS56 4.7 39.0 1.0
SG X:CYS56 4.7 37.9 1.0
C X:HIS50 4.8 22.2 1.0
HB3 X:ALA72 4.9 28.4 1.0
HA X:CYS48 4.9 25.7 1.0
SG X:CYS51 4.9 23.6 1.0
CZ X:ARG80 4.9 22.7 1.0
HA X:ARG49 4.9 25.9 1.0
SG X:CYS70 4.9 21.1 1.0
H X:CYS56 4.9 26.1 1.0
H X:ARG49 4.9 26.1 1.0
HB3 X:HIS50 5.0 26.5 1.0
C X:ARG49 5.0 21.2 1.0

Iron binding site 3 out of 12 in 8on2

Go back to Iron Binding Sites List in 8on2
Iron binding site 3 out of 12 in the Ni,Fe-Codh -600MV State : 24 H Dioxygen Exposure


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Ni,Fe-Codh -600MV State : 24 H Dioxygen Exposure within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Fe1001

b:21.7
occ:1.00
FE3 X:SF41001 0.0 21.7 1.0
S2 X:SF41001 2.3 22.1 1.0
S4 X:SF41001 2.3 19.6 1.0
SG X:CYS51 2.3 23.6 1.0
S1 X:SF41001 2.3 20.9 1.0
FE1 X:SF41001 2.7 21.2 1.0
FE2 X:SF41001 2.7 20.4 1.0
FE4 X:SF41001 2.7 22.2 1.0
HB3 X:CYS51 3.2 24.9 1.0
H X:CYS51 3.2 24.2 1.0
CB X:CYS51 3.3 20.7 1.0
N X:CYS51 3.6 19.8 1.0
HB2 X:GLN53 3.7 31.9 1.0
HG3 X:MET199 3.7 26.4 1.0
CA X:CYS51 3.9 25.7 1.0
S3 X:SF41001 3.9 20.7 1.0
HE21 X:GLN53 4.0 28.5 1.0
H X:GLY54 4.0 27.8 1.0
HB2 X:CYS51 4.1 24.9 1.0
HB2 X:MET199 4.2 26.6 1.0
O X:CYS51 4.2 24.2 1.0
C X:CYS51 4.2 25.0 1.0
H X:GLN53 4.3 25.8 1.0
HG2 X:MET199 4.4 26.4 1.0
C X:HIS50 4.4 22.2 1.0
CG X:MET199 4.4 22.1 1.0
N X:GLY54 4.4 23.1 1.0
HB3 X:CYS70 4.5 28.4 1.0
H X:HIS50 4.5 26.4 1.0
HB2 X:HIS50 4.5 26.5 1.0
HA3 X:GLY54 4.6 29.7 1.0
CB X:GLN53 4.6 26.7 1.0
SG X:CYS70 4.8 21.1 1.0
HA X:CYS51 4.8 31.0 1.0
NE2 X:GLN53 4.8 24.0 1.0
H X:CYS70 4.8 23.1 1.0
SG X:CYS48 4.8 21.0 1.0
CB X:MET199 4.8 22.0 1.0
N X:HIS50 4.8 22.4 1.0
SG X:CYS56 4.9 37.9 1.0
N X:GLN53 4.9 21.1 1.0
CA X:GLY54 5.0 24.7 1.0
HB X:ILE69 5.0 25.4 1.0

Iron binding site 4 out of 12 in 8on2

Go back to Iron Binding Sites List in 8on2
Iron binding site 4 out of 12 in the Ni,Fe-Codh -600MV State : 24 H Dioxygen Exposure


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Ni,Fe-Codh -600MV State : 24 H Dioxygen Exposure within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Fe1001

b:22.2
occ:1.00
FE4 X:SF41001 0.0 22.2 1.0
S3 X:SF41001 2.3 20.7 1.0
S1 X:SF41001 2.3 20.9 1.0
S2 X:SF41001 2.3 22.1 1.0
SG X:CYS70 2.3 21.1 1.0
FE2 X:SF41001 2.7 20.4 1.0
FE3 X:SF41001 2.7 21.7 1.0
FE1 X:SF41001 2.7 21.2 1.0
H X:CYS70 3.1 23.1 1.0
HB3 X:CYS70 3.2 28.4 1.0
HH22 X:ARG80 3.3 24.9 1.0
CB X:CYS70 3.4 23.8 1.0
HB3 X:ALA72 3.7 28.4 1.0
N X:CYS70 3.9 19.9 1.0
S4 X:SF41001 3.9 19.6 1.0
HG2 X:MET199 4.0 26.4 1.0
HB2 X:ALA72 4.1 28.4 1.0
O X:HOH1334 4.1 20.3 1.0
HB2 X:CYS70 4.1 28.4 1.0
NH2 X:ARG80 4.2 21.3 1.0
CA X:CYS70 4.3 21.3 1.0
HG3 X:MET199 4.3 26.4 1.0
H X:ILE69 4.3 25.9 1.0
HA3 X:GLY68 4.3 26.4 1.0
H X:ALA72 4.3 30.5 1.0
CB X:ALA72 4.4 23.2 1.0
HH21 X:ARG80 4.5 24.9 1.0
HH12 X:ARG80 4.6 26.5 1.0
CG X:MET199 4.6 22.1 1.0
N X:ILE69 4.6 21.4 1.0
SG X:CYS51 4.7 23.6 1.0
HB X:ILE69 4.7 25.4 1.0
SG X:CYS48 4.8 21.0 1.0
SG X:CYS56 4.9 37.9 1.0
HE21 X:GLN53 4.9 28.5 1.0
HB1 X:ALA72 5.0 28.4 1.0
HB2 X:MET199 5.0 26.6 1.0
HA X:CYS70 5.0 24.8 1.0

Iron binding site 5 out of 12 in 8on2

Go back to Iron Binding Sites List in 8on2
Iron binding site 5 out of 12 in the Ni,Fe-Codh -600MV State : 24 H Dioxygen Exposure


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of Ni,Fe-Codh -600MV State : 24 H Dioxygen Exposure within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Fe1002

b:29.4
occ:0.63
FE1 X:FES1002 0.0 29.4 0.6
S1 X:FES1002 2.2 27.7 0.6
S2 X:FES1002 2.2 29.0 0.6
SG X:CYS47 2.3 35.1 1.0
FE2 X:FES1002 2.6 27.0 0.6
O X:HOH1412 3.1 43.6 1.0
HB2 X:CYS47 3.1 37.2 1.0
CB X:CYS47 3.3 31.4 1.0
HB3 X:CYS47 3.6 37.2 1.0
HD2 X:ARG49 4.3 44.3 1.0
HB2 X:PHE41 4.3 43.6 1.0
HB2 X:PRO55 4.4 32.2 1.0
CA X:CYS47 4.6 21.9 1.0
HG3 X:ARG49 4.7 34.7 1.0
HA X:CYS47 4.7 25.7 1.0
SG X:CYS39 4.7 41.2 1.0
H X:GLY42 4.7 39.3 1.0
HB3 X:PRO55 4.8 32.2 1.0
HB3 X:ARG57 4.9 34.4 1.0
HA2 X:GLY42 5.0 42.1 1.0
HB3 X:PHE41 5.0 43.6 1.0
CD X:ARG49 5.0 37.2 1.0

Iron binding site 6 out of 12 in 8on2

Go back to Iron Binding Sites List in 8on2
Iron binding site 6 out of 12 in the Ni,Fe-Codh -600MV State : 24 H Dioxygen Exposure


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of Ni,Fe-Codh -600MV State : 24 H Dioxygen Exposure within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Fe1002

b:27.0
occ:0.63
FE2 X:FES1002 0.0 27.0 0.6
S2 X:FES1002 2.2 29.0 0.6
S1 X:FES1002 2.2 27.7 0.6
SG X:CYS39 2.4 41.2 1.0
FE1 X:FES1002 2.6 29.4 0.6
HB3 X:CYS39 3.3 35.4 1.0
CB X:CYS39 3.3 30.0 1.0
HB2 X:CYS39 3.4 35.4 1.0
H X:GLY42 3.6 39.3 1.0
HB2 X:PHE41 3.6 43.6 1.0
HD2 X:PHE41 4.0 48.2 1.0
N X:GLY42 4.3 35.0 1.0
HA3 X:GLY42 4.4 42.1 1.0
HB2 X:CYS47 4.4 37.2 1.0
CB X:PHE41 4.6 36.0 1.0
CA X:CYS39 4.7 33.8 1.0
SG X:CYS47 4.7 35.1 1.0
O X:HOH1412 4.7 43.6 1.0
CD2 X:PHE41 4.8 40.7 1.0
CA X:GLY42 4.8 36.8 1.0
H X:PHE41 4.8 41.1 1.0
HB3 X:PHE41 5.0 43.6 1.0
CB X:CYS47 5.0 31.4 1.0

Iron binding site 7 out of 12 in 8on2

Go back to Iron Binding Sites List in 8on2
Iron binding site 7 out of 12 in the Ni,Fe-Codh -600MV State : 24 H Dioxygen Exposure


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 7 of Ni,Fe-Codh -600MV State : 24 H Dioxygen Exposure within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Fe1003

b:62.7
occ:0.55
FE X:FE1004 1.7 67.1 0.5
SG X:CYS526 2.2 35.1 0.3
SG X:CYS526 2.7 34.8 0.7
HB2 X:CYS526 2.8 34.8 0.7
FE X:FE1006 3.0 55.3 0.6
FE X:FE1008 3.1 63.1 0.9
O X:HOH1442 3.1 44.9 0.7
CB X:CYS526 3.2 28.9 0.3
CB X:CYS526 3.2 29.0 0.7
HB3 X:CYS526 3.2 34.7 0.3
HB2 X:CYS526 3.2 34.7 0.3
HZ1 X:LYS563 3.2 41.1 1.0
HB3 X:CYS526 3.6 34.8 0.7
HZ3 X:LYS563 3.6 41.1 1.0
FE X:FE1005 3.7 73.6 0.6
NZ X:LYS563 3.8 35.2 1.0
NE2 X:HIS261 3.9 36.1 1.0
HA2 X:GLY445 4.0 31.3 1.0
HE2 X:HIS93 4.1 31.4 1.0
HB2 X:LYS563 4.2 24.6 1.0
HE3 X:LYS563 4.2 36.3 1.0
HB3 X:LYS563 4.3 24.6 1.0
HD2 X:LYS563 4.3 31.7 1.0
CE X:LYS563 4.5 31.0 1.0
HZ2 X:LYS563 4.5 41.1 1.0
O X:HOH1300 4.5 26.8 1.0
HD12 X:ILE567 4.5 33.1 1.0
CA X:CYS526 4.5 23.8 0.7
CA X:CYS526 4.6 23.9 0.3
HA X:CYS526 4.6 28.4 0.7
SG X:CYS446 4.6 31.5 1.0
HA X:CYS526 4.7 28.4 0.3
HE1 X:HIS261 4.7 35.9 1.0
CB X:LYS563 4.7 21.0 1.0
CE1 X:HIS261 4.7 30.5 1.0
CD2 X:HIS261 4.8 34.1 1.0
HA3 X:GLY475 4.8 30.9 1.0
CA X:GLY445 4.8 26.4 1.0
SG X:CYS295 4.8 32.8 1.0
HD2 X:HIS261 4.8 39.9 1.0
HB3 X:HIS561 4.8 29.1 1.0
H X:GLY445 4.9 29.8 1.0
NE2 X:HIS93 4.9 26.7 1.0
HB2 X:ALA564 4.9 26.6 1.0
C X:GLY445 4.9 26.4 1.0
CD X:LYS563 4.9 27.1 1.0
H X:CYS476 5.0 34.0 1.0
HD11 X:ILE567 5.0 33.1 1.0

Iron binding site 8 out of 12 in 8on2

Go back to Iron Binding Sites List in 8on2
Iron binding site 8 out of 12 in the Ni,Fe-Codh -600MV State : 24 H Dioxygen Exposure


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 8 of Ni,Fe-Codh -600MV State : 24 H Dioxygen Exposure within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Fe1004

b:67.1
occ:0.46
FE X:FE1003 1.7 62.7 0.6
O X:HOH1442 1.9 44.9 0.7
SG X:CYS526 2.2 35.1 0.3
FE X:FE1006 2.9 55.3 0.6
FE X:FE1008 2.9 63.1 0.9
HB2 X:CYS526 3.1 34.8 0.7
H X:CYS476 3.3 34.0 1.0
HA2 X:GLY445 3.4 31.3 1.0
HA3 X:GLY475 3.5 30.9 1.0
FE X:FE1005 3.5 73.6 0.6
O X:GLY445 3.6 28.2 1.0
SG X:CYS526 3.7 34.8 0.7
C X:GLY445 3.7 26.4 1.0
CB X:CYS526 3.7 28.9 0.3
CB X:CYS526 3.8 29.0 0.7
HB2 X:CYS526 3.8 34.7 0.3
O X:HOH1300 3.9 26.8 1.0
CA X:GLY445 3.9 26.4 1.0
H X:GLY445 4.0 29.8 1.0
FE X:FE1007 4.1 60.0 0.8
N X:CYS476 4.1 28.6 1.0
HB2 X:CYS476 4.1 38.6 1.0
HB3 X:CYS526 4.2 34.7 0.3
HA X:CYS446 4.2 40.2 1.0
N X:CYS446 4.3 34.6 1.0
SG X:CYS295 4.3 32.8 1.0
CA X:GLY475 4.3 24.7 1.0
SG X:CYS446 4.4 31.5 1.0
HB3 X:CYS526 4.4 34.8 0.7
HA2 X:GLY475 4.4 30.9 1.0
N X:GLY445 4.4 25.3 1.0
NE2 X:HIS261 4.5 36.1 1.0
O X:HOH1440 4.6 36.5 0.6
HA X:CYS526 4.7 28.4 0.7
CA X:CYS446 4.7 34.1 1.0
HZ1 X:LYS563 4.7 41.1 1.0
HZ3 X:LYS563 4.7 41.1 1.0
SG X:CYS476 4.7 40.4 1.0
HA X:CYS526 4.7 28.4 0.3
C X:GLY475 4.7 26.8 1.0
CB X:CYS476 4.8 32.4 1.0
HA3 X:GLY445 4.8 31.3 1.0
CA X:CYS526 4.8 23.8 0.7
CA X:CYS526 4.8 23.9 0.3
H X:CYS446 4.9 40.8 1.0
HB3 X:CYS446 4.9 24.0 1.0
CB X:CYS446 4.9 20.5 1.0
HE1 X:HIS261 5.0 35.9 1.0

Iron binding site 9 out of 12 in 8on2

Go back to Iron Binding Sites List in 8on2
Iron binding site 9 out of 12 in the Ni,Fe-Codh -600MV State : 24 H Dioxygen Exposure


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 9 of Ni,Fe-Codh -600MV State : 24 H Dioxygen Exposure within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Fe1005

b:73.6
occ:0.59
O X:HOH1440 1.7 36.5 0.6
FE X:FE1006 1.8 55.3 0.6
SG X:CYS333 2.5 37.5 1.0
FE X:FE1007 2.9 60.0 0.8
O X:HOH1442 2.9 44.9 0.7
HB3 X:CYS333 3.3 33.2 1.0
HB3 X:CYS446 3.4 24.0 1.0
FE X:FE1008 3.4 63.1 0.9
HE1 X:HIS261 3.5 35.9 1.0
CB X:CYS333 3.5 28.1 1.0
FE X:FE1004 3.5 67.1 0.5
HZ3 X:LYS563 3.6 41.1 1.0
HE3 X:MET560 3.6 41.9 1.0
FE X:FE1003 3.7 62.7 0.6
SG X:CYS446 3.7 31.5 1.0
HB2 X:HIS561 3.8 29.1 1.0
HB2 X:CYS333 3.9 33.2 1.0
HE1 X:MET560 3.9 41.9 1.0
CB X:CYS446 4.0 20.5 1.0
CE1 X:HIS261 4.2 30.5 1.0
CE X:MET560 4.2 35.2 1.0
HA X:CYS446 4.3 40.2 1.0
NE2 X:HIS261 4.4 36.1 1.0
HB3 X:HIS561 4.4 29.1 1.0
NZ X:LYS563 4.4 35.2 1.0
SG X:CSO294 4.4 35.6 0.3
CB X:HIS561 4.5 24.2 1.0
O X:HOH1340 4.6 34.3 1.0
HE3 X:LYS563 4.6 36.3 1.0
HZ1 X:LYS563 4.6 41.1 1.0
OD X:CSO294 4.7 30.7 0.3
CA X:CYS446 4.7 34.1 1.0
SG X:CSO294 4.7 36.6 0.3
HA X:CYS333 4.7 33.8 1.0
SG X:CYS476 4.8 40.4 1.0
HG X:SER312 4.8 36.8 1.0
CA X:CYS333 4.8 28.7 1.0
HD2 X:HIS561 4.8 25.4 1.0
HB2 X:CYS446 4.8 24.0 1.0
HE2 X:MET560 4.8 41.9 1.0
HB2 X:CYS476 5.0 38.6 1.0
HZ2 X:LYS563 5.0 41.1 1.0
CG X:HIS561 5.0 22.2 1.0
OD X:CSO294 5.0 30.7 0.3

Iron binding site 10 out of 12 in 8on2

Go back to Iron Binding Sites List in 8on2
Iron binding site 10 out of 12 in the Ni,Fe-Codh -600MV State : 24 H Dioxygen Exposure


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 10 of Ni,Fe-Codh -600MV State : 24 H Dioxygen Exposure within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Fe1006

b:55.3
occ:0.56
FE X:FE1005 1.8 73.6 0.6
SG X:CYS446 2.1 31.5 1.0
HB3 X:CYS446 2.8 24.0 1.0
FE X:FE1004 2.9 67.1 0.5
CB X:CYS446 3.0 20.5 1.0
O X:HOH1440 3.0 36.5 0.6
FE X:FE1003 3.0 62.7 0.6
O X:HOH1442 3.1 44.9 0.7
HB2 X:HIS561 3.4 29.1 1.0
HA X:CYS446 3.5 40.2 1.0
CA X:CYS446 3.6 34.1 1.0
HB3 X:HIS561 3.6 29.1 1.0
HE3 X:MET560 3.7 41.9 1.0
N X:CYS446 3.8 34.6 1.0
HB2 X:CYS446 3.8 24.0 1.0
H X:HIS561 3.9 27.0 1.0
SG X:CYS333 4.0 37.5 1.0
CB X:HIS561 4.0 24.2 1.0
HA2 X:GLY445 4.0 31.3 1.0
H X:CYS446 4.1 40.8 1.0
FE X:FE1007 4.1 60.0 0.8
C X:GLY445 4.1 26.4 1.0
HB2 X:ALA564 4.2 26.6 1.0
FE X:FE1008 4.2 63.1 0.9
HZ3 X:LYS563 4.3 41.1 1.0
HB3 X:MET560 4.5 30.2 1.0
O X:GLY445 4.6 28.2 1.0
CE X:MET560 4.6 35.2 1.0
CA X:GLY445 4.6 26.4 1.0
HE1 X:MET560 4.6 41.9 1.0
HB2 X:CYS476 4.7 38.6 1.0
N X:HIS561 4.7 22.5 1.0
HE3 X:LYS563 4.7 36.3 1.0
H X:MET560 4.8 29.3 1.0
SG X:CYS526 4.8 35.1 0.3
HB2 X:LYS563 4.9 24.6 1.0
CG X:HIS561 4.9 22.2 1.0
HE1 X:HIS261 5.0 35.9 1.0
HZ1 X:LYS563 5.0 41.1 1.0

Reference:

Y.Basak, J.H.Jeoung, L.Domnik, H.Dobbek. Stepwise O 2 -Induced Rearrangement and Disassembly of the [Nife 4 (Oh)( Mu 3 -S) 4 ] Active Site Cluster of Co Dehydrogenase. Angew.Chem.Int.Ed.Engl. V. 62 05341 2023.
ISSN: ESSN 1521-3773
PubMed: 37279092
DOI: 10.1002/ANIE.202305341
Page generated: Sat Aug 10 08:18:13 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy