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Iron in PDB 8r95: Multicopy-Refined Carboxymyoglobin Photolysis Time Series at 5 Mj/CM2 Laser Fluence, 1401 Fs Time Delay

Protein crystallography data

The structure of Multicopy-Refined Carboxymyoglobin Photolysis Time Series at 5 Mj/CM2 Laser Fluence, 1401 Fs Time Delay, PDB code: 8r95 was solved by T.Barends, I.Schlichting, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 9.95 / 1.40
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 63, 28.4, 35.3, 90, 107, 90
R / Rfree (%) 17.6 / 20.7

Iron Binding Sites:

The binding sites of Iron atom in the Multicopy-Refined Carboxymyoglobin Photolysis Time Series at 5 Mj/CM2 Laser Fluence, 1401 Fs Time Delay (pdb code 8r95). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Multicopy-Refined Carboxymyoglobin Photolysis Time Series at 5 Mj/CM2 Laser Fluence, 1401 Fs Time Delay, PDB code: 8r95:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 8r95

Go back to Iron Binding Sites List in 8r95
Iron binding site 1 out of 2 in the Multicopy-Refined Carboxymyoglobin Photolysis Time Series at 5 Mj/CM2 Laser Fluence, 1401 Fs Time Delay


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Multicopy-Refined Carboxymyoglobin Photolysis Time Series at 5 Mj/CM2 Laser Fluence, 1401 Fs Time Delay within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:8.8
occ:0.64
FE A:HEM201 0.0 8.8 0.6
FE A:HEM201 0.1 11.2 0.3
C A:CMO204 1.7 9.0 0.6
ND A:HEM201 1.8 11.1 0.3
NA A:HEM201 2.0 8.4 0.6
NB A:HEM201 2.0 8.7 0.6
NC A:HEM201 2.0 8.5 0.6
ND A:HEM201 2.0 10.6 0.6
NA A:HEM201 2.0 8.9 0.3
NE2 A:HIS93 2.0 8.4 0.6
NC A:HEM201 2.1 9.4 0.3
NB A:HEM201 2.1 9.6 0.3
NE2 A:HIS93 2.2 8.9 0.4
C1D A:HEM201 2.8 10.1 0.3
C4D A:HEM201 2.9 10.8 0.3
O A:CMO204 2.9 14.6 0.6
C1A A:HEM201 3.0 9.5 0.3
CE1 A:HIS93 3.0 9.7 0.6
C4B A:HEM201 3.0 8.7 0.6
C1A A:HEM201 3.0 8.8 0.6
C4A A:HEM201 3.0 8.9 0.6
C4C A:HEM201 3.0 9.3 0.6
C1B A:HEM201 3.0 9.3 0.6
C1C A:HEM201 3.0 9.3 0.6
C4D A:HEM201 3.0 10.6 0.6
C4C A:HEM201 3.0 9.9 0.3
C1D A:HEM201 3.0 9.9 0.6
C4B A:HEM201 3.0 8.3 0.3
CD2 A:HIS93 3.0 7.9 0.6
C1C A:HEM201 3.1 9.1 0.3
CE1 A:HIS93 3.1 10.5 0.4
C4A A:HEM201 3.1 9.2 0.3
C1B A:HEM201 3.1 9.1 0.3
CD2 A:HIS93 3.2 8.4 0.4
CHA A:HEM201 3.3 10.7 0.3
CHD A:HEM201 3.4 10.5 0.3
CHC A:HEM201 3.4 8.7 0.6
CHB A:HEM201 3.4 8.5 0.6
CHD A:HEM201 3.4 10.6 0.6
CHA A:HEM201 3.4 11.1 0.6
CHC A:HEM201 3.4 9.3 0.3
CHB A:HEM201 3.5 9.2 0.3
C A:CMO204 3.6 9.9 0.3
C2D A:HEM201 4.1 10.5 0.3
ND1 A:HIS93 4.1 9.9 0.6
C3D A:HEM201 4.1 12.2 0.3
CG A:HIS93 4.2 9.0 0.6
C3C A:HEM201 4.2 9.3 0.3
C3C A:HEM201 4.2 8.8 0.6
C2B A:HEM201 4.2 8.3 0.6
C3B A:HEM201 4.2 9.8 0.6
C2A A:HEM201 4.2 9.3 0.3
C2A A:HEM201 4.2 8.5 0.6
C2C A:HEM201 4.2 9.7 0.6
C3A A:HEM201 4.2 9.2 0.6
C2D A:HEM201 4.2 9.9 0.6
C3D A:HEM201 4.2 12.3 0.6
C2C A:HEM201 4.2 9.9 0.3
ND1 A:HIS93 4.2 10.5 0.4
C3A A:HEM201 4.3 9.4 0.3
C3B A:HEM201 4.3 9.4 0.3
C2B A:HEM201 4.3 9.2 0.3
CG A:HIS93 4.3 9.3 0.4
NE2 A:HIS64 4.4 17.0 0.4
NE2 A:HIS64 4.5 17.8 0.6
O A:CMO204 4.5 14.5 0.3
CG2 A:VAL68 4.6 12.0 0.4
CG2 A:VAL68 4.6 11.8 0.6
CD2 A:HIS97 5.0 12.4 0.4

Iron binding site 2 out of 2 in 8r95

Go back to Iron Binding Sites List in 8r95
Iron binding site 2 out of 2 in the Multicopy-Refined Carboxymyoglobin Photolysis Time Series at 5 Mj/CM2 Laser Fluence, 1401 Fs Time Delay


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Multicopy-Refined Carboxymyoglobin Photolysis Time Series at 5 Mj/CM2 Laser Fluence, 1401 Fs Time Delay within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:11.2
occ:0.35
FE A:HEM201 0.0 11.2 0.3
FE A:HEM201 0.1 8.8 0.6
C A:CMO204 1.8 9.0 0.6
ND A:HEM201 1.9 11.1 0.3
NE2 A:HIS93 1.9 8.4 0.6
NB A:HEM201 1.9 8.7 0.6
NA A:HEM201 2.0 8.4 0.6
NA A:HEM201 2.0 8.9 0.3
NC A:HEM201 2.0 8.5 0.6
ND A:HEM201 2.0 10.6 0.6
NC A:HEM201 2.1 9.4 0.3
NE2 A:HIS93 2.1 8.9 0.4
NB A:HEM201 2.1 9.6 0.3
CE1 A:HIS93 2.9 9.7 0.6
C1D A:HEM201 2.9 10.1 0.3
C4D A:HEM201 2.9 10.8 0.3
CD2 A:HIS93 2.9 7.9 0.6
C1B A:HEM201 3.0 9.3 0.6
C4B A:HEM201 3.0 8.7 0.6
C1A A:HEM201 3.0 9.5 0.3
C4A A:HEM201 3.0 8.9 0.6
CE1 A:HIS93 3.0 10.5 0.4
O A:CMO204 3.0 14.6 0.6
C1A A:HEM201 3.0 8.8 0.6
C1C A:HEM201 3.0 9.3 0.6
C4B A:HEM201 3.0 8.3 0.3
C4C A:HEM201 3.0 9.3 0.6
C4D A:HEM201 3.1 10.6 0.6
C4C A:HEM201 3.1 9.9 0.3
C1D A:HEM201 3.1 9.9 0.6
C1C A:HEM201 3.1 9.1 0.3
C4A A:HEM201 3.1 9.2 0.3
C1B A:HEM201 3.1 9.1 0.3
CD2 A:HIS93 3.1 8.4 0.4
CHB A:HEM201 3.4 8.5 0.6
CHA A:HEM201 3.4 10.7 0.3
CHC A:HEM201 3.4 8.7 0.6
CHD A:HEM201 3.4 10.5 0.3
CHC A:HEM201 3.4 9.3 0.3
CHA A:HEM201 3.4 11.1 0.6
CHD A:HEM201 3.4 10.6 0.6
CHB A:HEM201 3.5 9.2 0.3
C A:CMO204 3.7 9.9 0.3
ND1 A:HIS93 4.0 9.9 0.6
CG A:HIS93 4.1 9.0 0.6
ND1 A:HIS93 4.1 10.5 0.4
C2D A:HEM201 4.2 10.5 0.3
C3D A:HEM201 4.2 12.2 0.3
C2B A:HEM201 4.2 8.3 0.6
C3B A:HEM201 4.2 9.8 0.6
C3A A:HEM201 4.2 9.2 0.6
C2A A:HEM201 4.2 9.3 0.3
C2A A:HEM201 4.2 8.5 0.6
CG A:HIS93 4.2 9.3 0.4
C3C A:HEM201 4.2 9.3 0.3
C3C A:HEM201 4.2 8.8 0.6
C2C A:HEM201 4.2 9.7 0.6
C2C A:HEM201 4.2 9.9 0.3
C3A A:HEM201 4.3 9.4 0.3
C3D A:HEM201 4.3 12.3 0.6
C2D A:HEM201 4.3 9.9 0.6
C2B A:HEM201 4.3 9.2 0.3
C3B A:HEM201 4.3 9.4 0.3
NE2 A:HIS64 4.5 17.0 0.4
NE2 A:HIS64 4.6 17.8 0.6
O A:CMO204 4.6 14.5 0.3
CG2 A:VAL68 4.6 12.0 0.4
CG2 A:VAL68 4.7 11.8 0.6
CD2 A:HIS97 4.9 12.4 0.4
CD2 A:HIS97 5.0 12.6 0.6

Reference:

T.Barends, I.Schlichting. Influence of Pump Laser Fluence on Ultrafast Dynamics in Myoglobin To Be Published.
Page generated: Thu Aug 7 21:39:38 2025

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