Atomistry » Iron » PDB 8sqp-8u19 » 8u19
Atomistry »
  Iron »
    PDB 8sqp-8u19 »
      8u19 »

Iron in PDB 8u19: Crystal Structure of Syoa Bound to Syringol

Enzymatic activity of Crystal Structure of Syoa Bound to Syringol

All present enzymatic activity of Crystal Structure of Syoa Bound to Syringol:
1.14.14.1;

Protein crystallography data

The structure of Crystal Structure of Syoa Bound to Syringol, PDB code: 8u19 was solved by A.C.Harlington, K.E.Shearwin, S.G.Bell, F.Whelan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.15 / 1.26
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 57.851, 62.353, 58.71, 90, 103.06, 90
R / Rfree (%) 14.6 / 18.2

Other elements in 8u19:

The structure of Crystal Structure of Syoa Bound to Syringol also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Syoa Bound to Syringol (pdb code 8u19). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Syoa Bound to Syringol, PDB code: 8u19:

Iron binding site 1 out of 1 in 8u19

Go back to Iron Binding Sites List in 8u19
Iron binding site 1 out of 1 in the Crystal Structure of Syoa Bound to Syringol


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Syoa Bound to Syringol within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe501

b:12.1
occ:1.00
FE A:HEM501 0.0 12.1 1.0
NA A:HEM501 2.0 11.9 1.0
NC A:HEM501 2.0 12.9 1.0
NB A:HEM501 2.0 11.9 1.0
ND A:HEM501 2.1 12.3 1.0
SG A:CYS360 2.3 12.7 1.0
C1A A:HEM501 3.0 11.2 1.0
C4A A:HEM501 3.0 10.7 1.0
C4C A:HEM501 3.0 12.8 1.0
C4B A:HEM501 3.1 11.6 1.0
C1B A:HEM501 3.1 11.3 1.0
C1C A:HEM501 3.1 12.0 1.0
C4D A:HEM501 3.1 11.7 1.0
C1D A:HEM501 3.1 12.8 1.0
CB A:CYS360 3.3 12.0 1.0
CHD A:HEM501 3.4 12.7 1.0
CHC A:HEM501 3.4 11.6 1.0
CHB A:HEM501 3.4 10.7 1.0
CHA A:HEM501 3.4 11.6 1.0
C8 A:3DM502 3.6 15.1 1.0
CA A:CYS360 4.0 12.1 1.0
C3B A:HEM501 4.3 12.2 1.0
C3A A:HEM501 4.3 11.4 1.0
C3C A:HEM501 4.3 13.9 1.0
C2B A:HEM501 4.3 11.7 1.0
C2C A:HEM501 4.3 13.3 1.0
C2A A:HEM501 4.3 11.3 1.0
C3D A:HEM501 4.3 12.1 1.0
C2D A:HEM501 4.3 12.8 1.0
N A:GLY362 4.5 13.4 1.0
C A:CYS360 4.6 12.5 1.0
N A:SER361 4.7 12.8 1.0
O3 A:3DM502 4.9 14.1 1.0
CA A:GLY362 5.0 14.2 1.0

Reference:

A.C.Harlington, K.E.Shearwin, S.G.Bell, F.Whelan. Structural Insights Into the S-Lignin O-Demethylase Syoa To Be Published.
Page generated: Thu Aug 7 23:50:47 2025

Last articles

Gd in 6PP3
Gd in 6PP4
Gd in 6PP1
Gd in 6PP2
Gd in 6PP0
Gd in 6POZ
Gd in 6POY
Gd in 6POU
Gd in 6POW
Gd in 6POX
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy