Atomistry » Iron » PDB 8u1i-8uoq » 8ucn
Atomistry »
  Iron »
    PDB 8u1i-8uoq »
      8ucn »

Iron in PDB 8ucn: Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Histamine

Other elements in 8ucn:

The structure of Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Histamine also contains other interesting chemical elements:

Zinc (Zn) 1 atom
Copper (Cu) 3 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Histamine (pdb code 8ucn). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Histamine, PDB code: 8ucn:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 8ucn

Go back to Iron Binding Sites List in 8ucn
Iron binding site 1 out of 2 in the Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Histamine


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Histamine within 5.0Å range:
probe atom residue distance (Å) B Occ
a:Fe602

b:50.8
occ:1.00
FE a:HEA602 0.0 50.8 1.0
NA a:HEA602 1.9 50.8 1.0
ND a:HEA602 1.9 50.8 1.0
NB a:HEA602 1.9 50.8 1.0
NC a:HEA602 1.9 50.8 1.0
C1D a:HEA602 2.8 50.8 1.0
C1B a:HEA602 2.8 50.8 1.0
CE1 a:HIS380 2.8 48.4 1.0
C4A a:HEA602 2.9 50.8 1.0
C4C a:HEA602 2.9 50.8 1.0
C4B a:HEA602 3.0 50.8 1.0
C4D a:HEA602 3.0 50.8 1.0
C1C a:HEA602 3.0 50.8 1.0
C1A a:HEA602 3.0 50.8 1.0
CHD a:HEA602 3.0 50.8 1.0
CHB a:HEA602 3.1 50.8 1.0
CE1 a:HIS64 3.3 46.7 1.0
CHC a:HEA602 3.3 50.8 1.0
CHA a:HEA602 3.3 50.8 1.0
ND1 a:HIS380 3.5 48.4 1.0
NE2 a:HIS380 3.7 48.4 1.0
C3C a:HEA602 4.1 50.8 1.0
C3A a:HEA602 4.1 50.8 1.0
C2C a:HEA602 4.1 50.8 1.0
C2B a:HEA602 4.1 50.8 1.0
C2D a:HEA602 4.1 50.8 1.0
C2A a:HEA602 4.1 50.8 1.0
NE2 a:HIS64 4.1 46.7 1.0
C3D a:HEA602 4.2 50.8 1.0
ND1 a:HIS64 4.2 46.7 1.0
C3B a:HEA602 4.2 50.8 1.0
CG a:HIS380 4.6 48.4 1.0
CD2 a:HIS380 4.7 48.4 1.0
CE1 a:PHE379 4.8 48.7 1.0

Iron binding site 2 out of 2 in 8ucn

Go back to Iron Binding Sites List in 8ucn
Iron binding site 2 out of 2 in the Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Histamine


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Histamine within 5.0Å range:
probe atom residue distance (Å) B Occ
a:Fe603

b:51.2
occ:1.00
FE a:HEA603 0.0 51.2 1.0
NA a:HEA603 1.9 51.2 1.0
ND a:HEA603 1.9 51.2 1.0
NB a:HEA603 1.9 51.2 1.0
NC a:HEA603 1.9 51.2 1.0
C4B a:HEA603 2.8 51.2 1.0
C4D a:HEA603 2.9 51.2 1.0
C1C a:HEA603 2.9 51.2 1.0
C1A a:HEA603 2.9 51.2 1.0
C1D a:HEA603 3.0 51.2 1.0
C1B a:HEA603 3.0 51.2 1.0
C4A a:HEA603 3.0 51.2 1.0
C4C a:HEA603 3.0 51.2 1.0
CHC a:HEA603 3.0 51.2 1.0
CHA a:HEA603 3.1 51.2 1.0
CHD a:HEA603 3.3 51.2 1.0
CHB a:HEA603 3.3 51.2 1.0
CU a:CU601 4.0 54.9 1.0
CE1 a:HIS243 4.0 47.6 1.0
C2C a:HEA603 4.1 51.2 1.0
C2A a:HEA603 4.1 51.2 1.0
C3A a:HEA603 4.1 51.2 1.0
C3C a:HEA603 4.1 51.2 1.0
C3D a:HEA603 4.1 51.2 1.0
C3B a:HEA603 4.1 51.2 1.0
C2D a:HEA603 4.2 51.2 1.0
C2B a:HEA603 4.2 51.2 1.0
NE2 a:HIS378 4.2 49.5 1.0
ND1 a:HIS243 4.6 47.6 1.0
CG2 a:VAL246 4.7 46.9 1.0
CD2 a:HIS378 4.7 49.5 1.0

Reference:

J.Ye, B.Liu, W.Li. Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Histamine To Be Published.
Page generated: Thu Aug 7 23:54:45 2025

Last articles

Na in 6HJI
Na in 6HJB
Na in 6HK1
Na in 6HJA
Na in 6HJX
Na in 6HJ3
Na in 6HIP
Na in 6HHD
Na in 6HE3
Na in 6HE1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy