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Iron in PDB 8xmp: Structure of CD163 in Complex with Hb-Hp

Other elements in 8xmp:

The structure of Structure of CD163 in Complex with Hb-Hp also contains other interesting chemical elements:

Calcium (Ca) 23 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Structure of CD163 in Complex with Hb-Hp (pdb code 8xmp). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Structure of CD163 in Complex with Hb-Hp, PDB code: 8xmp:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 8xmp

Go back to Iron Binding Sites List in 8xmp
Iron binding site 1 out of 2 in the Structure of CD163 in Complex with Hb-Hp


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of CD163 in Complex with Hb-Hp within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe201

b:72.1
occ:1.00
FE C:HEM201 0.0 72.1 1.0
ND C:HEM201 2.0 56.6 1.0
NB C:HEM201 2.0 55.6 1.0
NA C:HEM201 2.0 57.4 1.0
NC C:HEM201 2.0 56.9 1.0
NE2 C:HIS87 2.1 45.1 1.0
C1C C:HEM201 3.0 55.0 1.0
C4C C:HEM201 3.0 54.8 1.0
CE1 C:HIS87 3.0 45.6 1.0
C4B C:HEM201 3.1 55.7 1.0
C1D C:HEM201 3.1 55.6 1.0
C4A C:HEM201 3.1 56.1 1.0
C4D C:HEM201 3.1 52.9 1.0
C1B C:HEM201 3.1 48.6 1.0
C1A C:HEM201 3.1 55.9 1.0
CD2 C:HIS87 3.1 36.1 1.0
CHC C:HEM201 3.4 54.2 1.0
CHD C:HEM201 3.4 52.7 1.0
CHB C:HEM201 3.4 52.9 1.0
CHA C:HEM201 3.4 51.6 1.0
NE2 C:HIS58 4.0 63.6 1.0
CE1 C:HIS58 4.2 60.0 1.0
ND1 C:HIS87 4.2 41.1 1.0
C2C C:HEM201 4.2 53.4 1.0
C3C C:HEM201 4.2 55.2 1.0
CG C:HIS87 4.3 38.3 1.0
C2D C:HEM201 4.3 55.8 1.0
C3A C:HEM201 4.3 56.0 1.0
C3D C:HEM201 4.3 55.5 1.0
C2A C:HEM201 4.3 56.4 1.0
C2B C:HEM201 4.3 49.9 1.0
C3B C:HEM201 4.3 51.5 1.0
CG2 C:VAL62 4.6 43.2 1.0

Iron binding site 2 out of 2 in 8xmp

Go back to Iron Binding Sites List in 8xmp
Iron binding site 2 out of 2 in the Structure of CD163 in Complex with Hb-Hp


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Structure of CD163 in Complex with Hb-Hp within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Fe201

b:51.9
occ:1.00
FE G:HEM201 0.0 51.9 1.0
NC G:HEM201 2.0 35.6 1.0
NA G:HEM201 2.0 43.2 1.0
ND G:HEM201 2.0 43.5 1.0
NB G:HEM201 2.1 46.2 1.0
NE2 G:HIS92 2.3 34.5 1.0
C1C G:HEM201 3.0 35.4 1.0
C1A G:HEM201 3.0 43.0 1.0
C4D G:HEM201 3.1 40.2 1.0
C4A G:HEM201 3.1 40.8 1.0
C4C G:HEM201 3.1 37.8 1.0
C1B G:HEM201 3.1 37.2 1.0
C4B G:HEM201 3.1 45.8 1.0
C1D G:HEM201 3.1 40.5 1.0
CE1 G:HIS92 3.1 37.4 1.0
CD2 G:HIS92 3.4 36.8 1.0
CHA G:HEM201 3.4 39.4 1.0
CHC G:HEM201 3.4 37.4 1.0
CHB G:HEM201 3.4 40.0 1.0
CHD G:HEM201 3.4 36.4 1.0
CE1 G:HIS63 3.8 45.8 1.0
CG2 G:VAL67 4.2 41.4 1.0
C2A G:HEM201 4.3 40.3 1.0
C3A G:HEM201 4.3 41.6 1.0
ND1 G:HIS92 4.3 37.8 1.0
C2C G:HEM201 4.3 37.1 1.0
C2B G:HEM201 4.3 38.2 1.0
C3D G:HEM201 4.3 39.8 1.0
C3C G:HEM201 4.3 38.7 1.0
C2D G:HEM201 4.3 42.1 1.0
C3B G:HEM201 4.3 41.8 1.0
NE2 G:HIS63 4.4 45.1 1.0
CG G:HIS92 4.5 32.6 1.0
ND1 G:HIS63 4.9 43.9 1.0

Reference:

H.Xu, X.D.Su. Structure of CD163 in Complex with Hb-Hp To Be Published.
Page generated: Sat Feb 8 18:44:40 2025

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