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Iron in PDB 8yhn: Crystal Structure of Cytochrome P450 107P2 From Streptomyces Avermitilis

Protein crystallography data

The structure of Crystal Structure of Cytochrome P450 107P2 From Streptomyces Avermitilis, PDB code: 8yhn was solved by E.S.Jeong, V.C.Kim, C.M.Kim, Y.B.Lee, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.21 / 1.99
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 59.128, 66.44, 111.756, 90, 90, 90
R / Rfree (%) 22.3 / 27.2

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Cytochrome P450 107P2 From Streptomyces Avermitilis (pdb code 8yhn). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Cytochrome P450 107P2 From Streptomyces Avermitilis, PDB code: 8yhn:

Iron binding site 1 out of 1 in 8yhn

Go back to Iron Binding Sites List in 8yhn
Iron binding site 1 out of 1 in the Crystal Structure of Cytochrome P450 107P2 From Streptomyces Avermitilis


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Cytochrome P450 107P2 From Streptomyces Avermitilis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe501

b:23.4
occ:1.00
FE A:HEM501 0.0 23.4 1.0
ND A:HEM501 1.9 24.2 1.0
NA A:HEM501 2.0 23.3 1.0
NC A:HEM501 2.0 26.4 1.0
NB A:HEM501 2.1 23.4 1.0
SG A:CYS357 2.2 24.2 1.0
O1 A:GOL502 2.7 46.1 1.0
C1D A:HEM501 2.9 23.3 1.0
C4D A:HEM501 2.9 22.6 1.0
C4C A:HEM501 3.0 27.1 1.0
C1A A:HEM501 3.0 21.8 1.0
C4B A:HEM501 3.0 23.8 1.0
C4A A:HEM501 3.0 22.9 1.0
C1B A:HEM501 3.1 23.8 1.0
C1 A:GOL502 3.1 53.5 1.0
C1C A:HEM501 3.1 25.8 1.0
CB A:CYS357 3.3 24.3 1.0
CHD A:HEM501 3.3 26.1 1.0
CHA A:HEM501 3.4 23.9 1.0
CHB A:HEM501 3.4 25.0 1.0
CHC A:HEM501 3.4 24.4 1.0
CA A:CYS357 4.1 23.8 1.0
C3C A:HEM501 4.2 28.5 1.0
C3A A:HEM501 4.2 20.4 1.0
C2A A:HEM501 4.2 19.0 1.0
C2D A:HEM501 4.2 24.2 1.0
C3D A:HEM501 4.2 24.1 1.0
C2C A:HEM501 4.2 27.5 1.0
C3B A:HEM501 4.3 25.8 1.0
C2B A:HEM501 4.3 24.9 1.0
O A:ALA247 4.6 32.3 1.0
C2 A:GOL502 4.6 52.9 1.0
CB A:ALA247 4.7 31.1 1.0
N A:GLY359 4.8 26.5 1.0
C A:CYS357 4.9 26.8 1.0

Reference:

L.-H.Xu, E.S.Jeong, V.C.Kim, C.M.Kim, Y.B.Lee. N/A N/A.
Page generated: Fri Aug 8 01:42:46 2025

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