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Iron in PDB 9c91: Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer

Enzymatic activity of Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer

All present enzymatic activity of Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer:
1.8.1.2;

Other elements in 9c91:

The structure of Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer also contains other interesting chemical elements:

Potassium (K) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer (pdb code 9c91). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 5 binding sites of Iron where determined in the Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer, PDB code: 9c91:
Jump to Iron binding site number: 1; 2; 3; 4; 5;

Iron binding site 1 out of 5 in 9c91

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Iron binding site 1 out of 5 in the Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe603

b:76.1
occ:1.00
FE1 B:SF4603 0.0 76.1 1.0
SG B:CYS434 2.3 35.4 1.0
S4 B:SF4603 2.3 63.9 1.0
S3 B:SF4603 2.3 61.0 1.0
S2 B:SF4603 2.3 51.5 1.0
FE4 B:SF4603 2.7 59.6 1.0
FE2 B:SF4603 2.7 47.4 1.0
FE3 B:SF4603 2.7 80.5 1.0
CB B:CYS434 3.1 27.3 1.0
CB B:CYS479 3.7 43.6 1.0
S1 B:SF4603 3.9 47.1 1.0
CB B:CYS483 3.9 35.8 1.0
N B:GLY478 4.0 29.7 1.0
N B:CYS479 4.2 44.8 1.0
N B:SER436 4.4 35.4 1.0
CA B:SER436 4.5 33.8 1.0
CA B:CYS434 4.5 31.4 1.0
CB B:THR477 4.5 27.9 1.0
C B:GLY478 4.5 43.4 1.0
CA B:CYS479 4.6 31.1 1.0
CB B:SER436 4.6 38.4 1.0
SG B:CYS483 4.6 61.1 1.0
CA B:GLY478 4.6 32.2 1.0
N B:CYS483 4.7 41.0 1.0
CA B:THR477 4.7 35.9 1.0
C B:THR477 4.8 42.7 1.0
CA B:CYS483 4.9 36.3 1.0
N B:VAL435 4.9 35.8 1.0
C B:CYS434 4.9 43.1 1.0
SG B:CYS440 4.9 39.4 1.0
SG B:CYS479 5.0 45.3 1.0

Iron binding site 2 out of 5 in 9c91

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Iron binding site 2 out of 5 in the Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe603

b:47.4
occ:1.00
FE2 B:SF4603 0.0 47.4 1.0
SG B:CYS440 2.3 39.4 1.0
S3 B:SF4603 2.3 61.0 1.0
S4 B:SF4603 2.3 63.9 1.0
S1 B:SF4603 2.3 47.1 1.0
FE4 B:SF4603 2.7 59.6 1.0
FE3 B:SF4603 2.7 80.5 1.0
FE1 B:SF4603 2.7 76.1 1.0
CB B:CYS440 3.4 36.8 1.0
S2 B:SF4603 3.9 51.5 1.0
CB B:CYS479 4.1 43.6 1.0
CA B:SER436 4.4 33.8 1.0
N B:SER436 4.4 35.4 1.0
SG B:CYS479 4.5 45.3 1.0
N B:ALA443 4.5 31.1 1.0
CDA B:SRM604 4.5 48.0 1.0
C3A B:SRM604 4.6 51.7 1.0
CA B:ALA443 4.6 21.5 1.0
CB B:ALA443 4.7 38.5 1.0
SG B:CYS434 4.7 35.4 1.0
SG B:CYS483 4.8 61.1 1.0
CA B:CYS440 4.8 35.3 1.0
C4A B:SRM604 4.8 51.3 1.0
C B:LEU442 4.8 36.5 1.0
CBA B:SRM604 4.8 51.1 1.0
CB B:LEU442 4.9 29.6 1.0
C1A B:SRM604 5.0 44.9 1.0
CB B:CYS483 5.0 35.8 1.0

Iron binding site 3 out of 5 in 9c91

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Iron binding site 3 out of 5 in the Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe603

b:80.5
occ:1.00
FE3 B:SF4603 0.0 80.5 1.0
CB B:CYS479 1.6 43.6 1.0
S1 B:SF4603 2.3 47.1 1.0
S4 B:SF4603 2.3 63.9 1.0
S2 B:SF4603 2.3 51.5 1.0
SG B:CYS479 2.3 45.3 1.0
FE2 B:SF4603 2.7 47.4 1.0
FE4 B:SF4603 2.7 59.6 1.0
FE1 B:SF4603 2.7 76.1 1.0
CA B:CYS479 3.1 31.1 1.0
ND2 B:ASN481 3.5 35.4 1.0
N B:CYS479 3.6 44.8 1.0
C B:CYS479 3.9 37.3 1.0
S3 B:SF4603 3.9 61.0 1.0
CB B:ASN481 4.1 32.7 1.0
CG B:ASN481 4.2 38.0 1.0
C B:GLY478 4.2 43.4 1.0
O B:CYS479 4.3 49.3 1.0
O B:LEU442 4.4 40.3 1.0
N B:ASN481 4.5 39.3 1.0
O B:GLY478 4.5 58.0 1.0
SG B:CYS440 4.6 39.4 1.0
N B:PRO480 4.6 40.0 1.0
C B:LEU442 4.7 36.5 1.0
CA B:ALA443 4.8 21.5 1.0
SG B:CYS483 4.8 61.1 1.0
CA B:ASN481 4.9 30.9 1.0
CB B:LEU442 4.9 29.6 1.0
SG B:CYS434 4.9 35.4 1.0
N B:ALA443 5.0 31.1 1.0

Iron binding site 4 out of 5 in 9c91

Go back to Iron Binding Sites List in 9c91
Iron binding site 4 out of 5 in the Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe603

b:59.6
occ:1.00
FE4 B:SF4603 0.0 59.6 1.0
SG B:CYS483 2.2 61.1 1.0
S1 B:SF4603 2.3 47.1 1.0
S2 B:SF4603 2.3 51.5 1.0
S3 B:SF4603 2.3 61.0 1.0
CB B:CYS483 2.6 35.8 1.0
FE1 B:SF4603 2.7 76.1 1.0
FE2 B:SF4603 2.7 47.4 1.0
FE3 B:SF4603 2.7 80.5 1.0
CA B:CYS483 3.8 36.3 1.0
N B:CYS483 3.9 41.0 1.0
S4 B:SF4603 3.9 63.9 1.0
NA B:SRM604 3.9 52.6 1.0
CB B:ASN481 4.1 32.7 1.0
FE B:SRM604 4.2 78.7 1.0
CB B:CYS479 4.2 43.6 1.0
ND2 B:ASN481 4.2 35.4 1.0
C4A B:SRM604 4.2 51.3 1.0
ND B:SRM604 4.2 50.1 1.0
C1A B:SRM604 4.3 44.9 1.0
C4D B:SRM604 4.4 47.4 1.0
CHA B:SRM604 4.5 49.3 1.0
CB B:CYS434 4.6 27.3 1.0
CHB B:SRM604 4.6 48.7 1.0
SG B:CYS440 4.7 39.4 1.0
SG B:CYS434 4.7 35.4 1.0
SG B:CYS479 4.7 45.3 1.0
CG B:ASN481 4.7 38.0 1.0
C3A B:SRM604 4.8 51.7 1.0
NB B:SRM604 4.9 54.4 1.0
C1D B:SRM604 4.9 43.8 1.0
C1B B:SRM604 4.9 49.0 1.0
C B:CYS483 5.0 42.6 1.0

Iron binding site 5 out of 5 in 9c91

Go back to Iron Binding Sites List in 9c91
Iron binding site 5 out of 5 in the Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe604

b:78.7
occ:1.00
FE B:SRM604 0.0 78.7 1.0
NB B:SRM604 2.0 54.4 1.0
ND B:SRM604 2.0 50.1 1.0
NA B:SRM604 2.0 52.6 1.0
NC B:SRM604 2.0 57.0 1.0
SG B:CYS483 2.3 61.1 1.0
O1 B:PO4601 2.9 52.5 1.0
C4B B:SRM604 3.0 50.2 1.0
C1B B:SRM604 3.0 49.0 1.0
C4A B:SRM604 3.0 51.3 1.0
C1D B:SRM604 3.0 43.8 1.0
C4D B:SRM604 3.0 47.4 1.0
C1A B:SRM604 3.0 44.9 1.0
C4C B:SRM604 3.0 51.6 1.0
C1C B:SRM604 3.0 53.2 1.0
O3 B:PO4601 3.1 52.8 1.0
CHD B:SRM604 3.4 41.3 1.0
CHA B:SRM604 3.4 49.3 1.0
CHB B:SRM604 3.4 48.7 1.0
CHC B:SRM604 3.4 48.3 1.0
P B:PO4601 3.5 42.1 1.0
CB B:CYS483 3.5 35.8 1.0
O2 B:PO4601 4.0 50.3 1.0
FE4 B:SF4603 4.2 59.6 1.0
C3B B:SRM604 4.2 45.7 1.0
C2B B:SRM604 4.2 46.8 1.0
C3A B:SRM604 4.3 51.7 1.0
C2D B:SRM604 4.3 49.3 1.0
C2A B:SRM604 4.3 41.6 1.0
C3D B:SRM604 4.3 47.8 1.0
C3C B:SRM604 4.3 53.5 1.0
C2C B:SRM604 4.3 50.7 1.0
CA B:CYS483 4.3 36.3 1.0
NZ B:LYS215 4.8 47.2 1.0
CDB B:SRM604 4.8 53.6 1.0
O4 B:PO4601 4.9 60.8 1.0
CMA B:SRM604 4.9 50.8 1.0
CAB B:SRM604 4.9 48.5 1.0

Reference:

B.Ghazi Esfahani, N.Walia, K.Neselu, M.Aragon, I.Askenasy, A.Wei, J.H.Mendez, M.E.Stroupe. Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer To Be Published.
Page generated: Tue Feb 25 09:58:26 2025

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