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Iron in PDB 9ebr: The Structure of Niar From Thermotoga Maritima Bound to Nicotinic Acid

Protein crystallography data

The structure of The Structure of Niar From Thermotoga Maritima Bound to Nicotinic Acid, PDB code: 9ebr was solved by A.Glasfeld, D.W.C.Cheng, Y.Li, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.33 / 2.30
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 83.243, 83.243, 66.838, 90, 90, 120
R / Rfree (%) 21.7 / 26

Iron Binding Sites:

The binding sites of Iron atom in the The Structure of Niar From Thermotoga Maritima Bound to Nicotinic Acid (pdb code 9ebr). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the The Structure of Niar From Thermotoga Maritima Bound to Nicotinic Acid, PDB code: 9ebr:

Iron binding site 1 out of 1 in 9ebr

Go back to Iron Binding Sites List in 9ebr
Iron binding site 1 out of 1 in the The Structure of Niar From Thermotoga Maritima Bound to Nicotinic Acid


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of The Structure of Niar From Thermotoga Maritima Bound to Nicotinic Acid within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:61.4
occ:1.00
OE1 A:GLU87 2.2 63.2 1.0
NE2 A:HIS79 2.2 73.8 1.0
NE2 A:HIS148 2.3 68.5 1.0
NE2 A:HIS146 2.3 69.0 1.0
N A:NIO202 2.4 62.0 1.0
OE2 A:GLU87 2.6 78.8 1.0
CD A:GLU87 2.7 77.4 1.0
CD2 A:HIS148 3.0 72.7 1.0
CE1 A:HIS79 3.1 74.2 1.0
CE1 A:HIS146 3.1 75.2 1.0
H1 A:NIO202 3.1 79.9 1.0
C1 A:NIO202 3.2 66.5 1.0
CD2 A:HIS79 3.3 73.8 1.0
C5 A:NIO202 3.3 61.9 1.0
H5 A:NIO202 3.3 74.4 1.0
CE1 A:HIS148 3.4 64.5 1.0
CD2 A:HIS146 3.4 72.5 1.0
CG2 A:VAL77 4.0 71.8 1.0
CG A:GLU87 4.2 69.4 1.0
ND1 A:HIS79 4.2 81.5 1.0
CG A:HIS148 4.3 66.1 1.0
ND1 A:HIS146 4.3 77.0 1.0
CG A:HIS79 4.4 78.8 1.0
ND1 A:HIS148 4.4 64.1 1.0
CG A:HIS146 4.5 75.4 1.0
C2 A:NIO202 4.5 65.7 1.0
C4 A:NIO202 4.6 69.2 1.0
CB A:GLU87 4.7 76.5 1.0
CD2 A:LEU139 5.0 71.6 1.0

Reference:

A.Glasfeld, D.W.C.Cheng, Y.Li. The Structure of Niar From Thermotoga Maritima Bound to Nicotinic Acid To Be Published.
Page generated: Sat Feb 8 19:40:38 2025

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