Iron in PDB 9f5y: Structure of the Chlamydomonas Reinhardtii Respiratory Complex I From Respiratory Supercomplex

All present enzymatic activity of Structure of the Chlamydomonas Reinhardtii Respiratory Complex I From Respiratory Supercomplex:
1.6.5.3; 1.6.99.3; 7.1.1.2;

The structure of Structure of the Chlamydomonas Reinhardtii Respiratory Complex I From Respiratory Supercomplex also contains other interesting chemical elements:

Zinc

(Zn)

1 atom

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 28;

Binding sites:

The binding sites of Iron atom in the Structure of the Chlamydomonas Reinhardtii Respiratory Complex I From Respiratory Supercomplex (pdb code 9f5y). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 28 binding sites of Iron where determined in the Structure of the Chlamydomonas Reinhardtii Respiratory Complex I From Respiratory Supercomplex, PDB code: 9f5y:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Iron binding site 1 out of 28 in the Structure of the Chlamydomonas Reinhardtii Respiratory Complex I From Respiratory Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of the Chlamydomonas Reinhardtii Respiratory Complex I From Respiratory Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe301 b:46.2 occ:1.00 FE1 A:FES301 0.0 46.2 1.0 S1 A:FES301 2.2 40.1 1.0 S2 A:FES301 2.2 42.0 1.0 SG A:CYS191 2.3 45.2 1.0 SG A:CYS187 2.3 55.0 1.0 FE2 A:FES301 2.7 43.3 1.0 CB A:CYS187 3.1 39.7 1.0 CA A:CYS187 3.5 38.3 1.0 N A:MET188 3.6 34.8 1.0 CB A:CYS191 3.7 32.9 1.0 C A:CYS187 3.9 38.5 1.0 N A:GLY189 3.9 30.1 1.0 CA A:CYS191 4.2 33.5 1.0 SG A:CYS146 4.2 31.4 1.0 N A:CYS191 4.3 33.8 1.0 N A:ALA190 4.4 33.1 1.0 N B:GLY144 4.4 29.6 1.0 CA A:GLY189 4.6 28.2 1.0 SG A:CYS151 4.7 37.6 1.0 CA A:MET188 4.7 32.3 1.0 C A:MET188 4.8 37.1 1.0 C A:ALA190 4.9 34.3 1.0 CA B:PRO143 4.9 37.7 1.0 N A:CYS187 4.9 40.4 1.0 CB A:PRO150 4.9 25.6 1.0 O A:CYS187 4.9 38.1 1.0 CG A:PRO150 5.0 29.5 1.0

Iron binding site 2 out of 28 in the Structure of the Chlamydomonas Reinhardtii Respiratory Complex I From Respiratory Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Structure of the Chlamydomonas Reinhardtii Respiratory Complex I From Respiratory Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe301 b:43.3 occ:1.00 FE2 A:FES301 0.0 43.3 1.0 S1 A:FES301 2.2 40.1 1.0 S2 A:FES301 2.2 42.0 1.0 SG A:CYS151 2.3 37.6 1.0 SG A:CYS146 2.3 31.4 1.0 FE1 A:FES301 2.7 46.2 1.0 CB A:CYS151 3.3 26.5 1.0 CB A:CYS146 3.4 28.0 1.0 N A:CYS151 4.1 29.5 1.0 CA A:CYS151 4.2 26.7 1.0 CA A:CYS187 4.2 38.3 1.0 N A:MET188 4.2 34.8 1.0 SG A:CYS191 4.4 45.2 1.0 SG A:CYS187 4.6 55.0 1.0 CB A:CYS187 4.6 39.7 1.0 CG A:MET196 4.7 36.2 1.0 CA A:CYS146 4.7 31.8 1.0 C A:CYS187 4.8 38.5 1.0 SD A:MET196 4.8 54.5 1.0 O A:THR148 4.9 42.9 1.0 CB A:THR148 5.0 25.5 1.0 CA A:CYS191 5.0 33.5 1.0 C A:CYS146 5.0 30.3 1.0

Iron binding site 3 out of 28 in the Structure of the Chlamydomonas Reinhardtii Respiratory Complex I From Respiratory Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Structure of the Chlamydomonas Reinhardtii Respiratory Complex I From Respiratory Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe502 b:34.8 occ:1.00 FE1 B:SF4502 0.0 34.8 1.0 SG B:CYS400 2.3 23.6 1.0 S4 B:SF4502 2.3 15.5 1.0 S2 B:SF4502 2.3 23.7 1.0 S3 B:SF4502 2.3 12.2 1.0 FE4 B:SF4502 2.7 32.6 1.0 FE2 B:SF4502 2.7 40.8 1.0 FE3 B:SF4502 2.7 30.7 1.0 CB B:CYS400 3.5 16.9 1.0 N B:CYS400 3.8 3.3 1.0 S1 B:SF4502 3.9 22.5 1.0 N B:GLN402 3.9 10.1 1.0 N B:GLY401 4.0 18.8 1.0 CA B:CYS400 4.0 2.3 1.0 CB B:GLN402 4.1 19.8 1.0 C B:CYS400 4.2 19.1 1.0 CD B:PRO244 4.4 17.0 1.0 CA B:GLN402 4.5 10.4 1.0 N B:CYS403 4.6 21.2 1.0 SG B:CYS403 4.8 24.6 1.0 SG B:CYS446 4.8 29.7 1.0 C B:GLY401 4.8 7.3 1.0 OE1 B:GLN402 4.8 14.8 1.0 SG B:CYS406 4.9 19.1 1.0 CA B:GLY401 4.9 11.8 1.0 OG B:SER399 4.9 24.4 1.0 CG B:PRO244 5.0 7.1 1.0

Iron binding site 4 out of 28 in the Structure of the Chlamydomonas Reinhardtii Respiratory Complex I From Respiratory Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Structure of the Chlamydomonas Reinhardtii Respiratory Complex I From Respiratory Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe502 b:40.8 occ:1.00 FE2 B:SF4502 0.0 40.8 1.0 SG B:CYS403 2.2 24.6 1.0 S3 B:SF4502 2.3 12.2 1.0 S4 B:SF4502 2.3 15.5 1.0 S1 B:SF4502 2.3 22.5 1.0 FE3 B:SF4502 2.7 30.7 1.0 FE1 B:SF4502 2.7 34.8 1.0 FE4 B:SF4502 2.7 32.6 1.0 CB B:CYS403 3.6 10.7 1.0 CB B:CYS406 3.7 8.8 1.0 N B:CYS403 3.9 21.2 1.0 S2 B:SF4502 3.9 23.7 1.0 CA B:CYS403 4.2 15.8 1.0 N B:ILE445 4.3 8.1 1.0 CB B:ILE445 4.3 18.2 1.0 SG B:CYS406 4.4 19.1 1.0 CB B:THR444 4.4 13.5 1.0 O B:CYS403 4.6 23.5 1.0 N B:CYS446 4.6 19.8 1.0 CG1 B:ILE445 4.7 20.8 1.0 SG B:CYS446 4.8 29.7 1.0 C B:CYS403 4.8 16.1 1.0 SG B:CYS400 4.8 23.6 1.0 CA B:ILE445 4.8 12.5 1.0 CB B:GLN402 4.9 19.8 1.0 N B:GLN402 4.9 10.1 1.0 C B:GLN402 4.9 14.1 1.0 CD1 B:ILE445 5.0 15.9 1.0 CG2 B:THR444 5.0 15.0 1.0

Iron binding site 5 out of 28 in the Structure of the Chlamydomonas Reinhardtii Respiratory Complex I From Respiratory Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of Structure of the Chlamydomonas Reinhardtii Respiratory Complex I From Respiratory Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe502 b:30.7 occ:1.00 FE3 B:SF4502 0.0 30.7 1.0 SG B:CYS406 2.3 19.1 1.0 S4 B:SF4502 2.3 15.5 1.0 S2 B:SF4502 2.3 23.7 1.0 S1 B:SF4502 2.3 22.5 1.0 FE2 B:SF4502 2.7 40.8 1.0 FE1 B:SF4502 2.7 34.8 1.0 FE4 B:SF4502 2.7 32.6 1.0 CB B:CYS406 2.8 8.8 1.0 S3 B:SF4502 3.9 12.2 1.0 OG B:SER399 3.9 24.4 1.0 CD2 B:LEU448 4.2 20.2 1.0 CA B:CYS406 4.3 14.9 1.0 CB B:LEU448 4.4 17.2 1.0 N B:CYS400 4.4 3.3 1.0 SG B:CYS403 4.5 24.6 1.0 CB B:SER399 4.6 14.9 1.0 CA B:SER399 4.6 21.9 1.0 SG B:CYS446 4.7 29.7 1.0 CG B:LEU448 4.7 18.6 1.0 SG B:CYS400 4.8 23.6 1.0 N B:GLY449 4.8 29.5 1.0 C B:CYS406 4.8 15.2 1.0 N B:GLY401 5.0 18.8 1.0 N B:ARG407 5.0 14.2 1.0

Iron binding site 6 out of 28 in the Structure of the Chlamydomonas Reinhardtii Respiratory Complex I From Respiratory Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of Structure of the Chlamydomonas Reinhardtii Respiratory Complex I From Respiratory Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe502 b:32.6 occ:1.00 FE4 B:SF4502 0.0 32.6 1.0 SG B:CYS446 2.3 29.7 1.0 S1 B:SF4502 2.3 22.5 1.0 S3 B:SF4502 2.3 12.2 1.0 S2 B:SF4502 2.3 23.7 1.0 FE1 B:SF4502 2.7 34.8 1.0 FE2 B:SF4502 2.7 40.8 1.0 FE3 B:SF4502 2.7 30.7 1.0 CB B:CYS446 3.5 13.7 1.0 S4 B:SF4502 3.9 15.5 1.0 N B:CYS446 3.9 19.8 1.0 CA B:CYS446 4.1 14.1 1.0 CB B:LEU448 4.1 17.2 1.0 CG B:PRO244 4.4 7.1 1.0 CD1 B:ILE226 4.4 26.8 1.0 C B:CYS446 4.4 25.4 1.0 N B:LEU448 4.6 12.1 1.0 O B:CYS446 4.6 30.5 1.0 SG B:CYS400 4.7 23.6 1.0 CD B:PRO244 4.7 17.0 1.0 SG B:CYS406 4.8 19.1 1.0 SG B:CYS403 4.8 24.6 1.0 CA B:LEU448 4.9 17.6 1.0

Iron binding site 7 out of 28 in the Structure of the Chlamydomonas Reinhardtii Respiratory Complex I From Respiratory Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 7 of Structure of the Chlamydomonas Reinhardtii Respiratory Complex I From Respiratory Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe801 b:41.0 occ:1.00 FE1 C:FES801 0.0 41.0 1.0 S2 C:FES801 2.2 25.3 1.0 S1 C:FES801 2.2 18.0 1.0 SG C:CYS94 2.3 19.4 1.0 SG C:CYS83 2.3 24.6 1.0 FE2 C:FES801 2.7 35.5 1.0 CB C:CYS94 3.3 11.0 1.0 N C:CYS94 3.5 17.6 1.0 CB C:CYS83 3.7 14.9 1.0 N C:CYS83 3.8 19.1 1.0 CA C:CYS94 3.8 14.7 1.0 N C:ARG95 3.8 28.2 1.0 C C:CYS94 4.2 20.8 1.0 CA C:CYS83 4.2 13.1 1.0 N C:TYR84 4.3 16.5 1.0 N C:ASN93 4.4 19.3 1.0 N C:MET96 4.4 19.7 1.0 N C:PHE82 4.4 23.5 1.0 SG C:CYS111 4.5 21.3 1.0 SG C:CYS97 4.5 20.6 1.0 CA C:GLY92 4.6 16.8 1.0 C C:CYS83 4.6 16.0 1.0 C C:GLY92 4.7 10.8 1.0 C C:ASN93 4.7 20.9 1.0 CA C:ARG95 4.8 16.4 1.0 C C:PHE82 4.9 12.5 1.0 N C:CYS97 4.9 13.8 1.0 N C:GLY92 5.0 24.2 1.0 CB C:CYS97 5.0 17.4 1.0

Iron binding site 8 out of 28 in the Structure of the Chlamydomonas Reinhardtii Respiratory Complex I From Respiratory Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 8 of Structure of the Chlamydomonas Reinhardtii Respiratory Complex I From Respiratory Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe801 b:35.5 occ:1.00 FE2 C:FES801 0.0 35.5 1.0 S1 C:FES801 2.2 18.0 1.0 S2 C:FES801 2.2 25.3 1.0 SG C:CYS97 2.3 20.6 1.0 SG C:CYS111 2.3 21.3 1.0 FE1 C:FES801 2.7 41.0 1.0 CB C:CYS111 3.1 14.4 1.0 CB C:CYS97 3.4 17.4 1.0 N C:CYS111 4.1 26.4 1.0 SG C:CYS83 4.2 24.6 1.0 CA C:CYS111 4.2 13.2 1.0 N C:CYS97 4.4 13.8 1.0 CA C:GLY92 4.5 16.8 1.0 CA C:CYS97 4.5 19.3 1.0 SG C:CYS94 4.6 19.4 1.0 CB C:ALA109 4.7 24.6 1.0 CB C:TYR84 4.9 17.4 1.0

Iron binding site 9 out of 28 in the Structure of the Chlamydomonas Reinhardtii Respiratory Complex I From Respiratory Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 9 of Structure of the Chlamydomonas Reinhardtii Respiratory Complex I From Respiratory Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe802 b:37.0 occ:1.00 FE1 C:SF4802 0.0 37.0 1.0 S2 C:SF4802 2.3 28.4 1.0 S4 C:SF4802 2.3 12.8 1.0 S3 C:SF4802 2.3 16.8 1.0 SG C:CYS150 2.3 21.7 1.0 FE4 C:SF4802 2.7 27.7 1.0 FE3 C:SF4802 2.7 34.9 1.0 FE2 C:SF4802 2.7 34.8 1.0 CB C:CYS150 3.0 15.8 1.0 S1 C:SF4802 3.9 18.9 1.0 CD C:ARG194 4.4 13.9 1.0 N C:GLY248 4.4 15.9 1.0 NE2 C:HIS143 4.4 22.8 1.0 CA C:CYS150 4.5 12.0 1.0 CB C:GLN152 4.6 12.7 1.0 SG C:CYS156 4.6 19.0 1.0 CA C:GLY248 4.6 7.1 1.0 CA C:CYS147 4.7 6.4 1.0 SG C:CYS147 4.8 24.7 1.0 O C:ASP146 4.9 28.9 1.0 NE C:ARG194 4.9 14.3 1.0 N C:CYS147 4.9 7.1 1.0 N C:GLY153 4.9 20.6 1.0 C C:ASP146 5.0 17.3 1.0

Iron binding site 10 out of 28 in the Structure of the Chlamydomonas Reinhardtii Respiratory Complex I From Respiratory Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 10 of Structure of the Chlamydomonas Reinhardtii Respiratory Complex I From Respiratory Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe802 b:34.8 occ:1.00 FE2 C:SF4802 0.0 34.8 1.0 NE2 C:HIS143 2.0 22.8 1.0 S3 C:SF4802 2.3 16.8 1.0 S4 C:SF4802 2.3 12.8 1.0 S1 C:SF4802 2.3 18.9 1.0 FE4 C:SF4802 2.7 27.7 1.0 FE3 C:SF4802 2.7 34.9 1.0 FE1 C:SF4802 2.7 37.0 1.0 CD2 C:HIS143 2.9 16.1 1.0 CE1 C:HIS143 3.1 15.2 1.0 S2 C:SF4802 3.9 28.4 1.0 CG C:HIS143 4.1 19.5 1.0 ND1 C:HIS143 4.1 12.9 1.0 CD2 C:LEU158 4.3 16.1 1.0 CE E:MET379 4.3 19.3 1.0 SG C:CYS147 4.6 24.7 1.0 SG C:CYS156 4.7 19.0 1.0 O C:PRO144 4.9 26.5 1.0 SG C:CYS150 4.9 21.7 1.0

F.Waltz, R.Righetto, L.Lamm, T.Salinas-Giege, R.Kelley, X.Zhang, M.Obr, S.Khavnekar, A.Kotecha, B.D.Engel. In-Cell Architecture of the Mitochondrial Respiratory Chain Science 2025.
ISSN: ESSN 1095-9203
DOI: 10.1126/SCIENCE.ADS8738