Iron in PDB 9mgz: Dunaliella Tertiolecta Psi-Lhci-TIDI1 Supercomplex

All present enzymatic activity of Dunaliella Tertiolecta Psi-Lhci-TIDI1 Supercomplex:
1.97.1.12;

The structure of Dunaliella Tertiolecta Psi-Lhci-TIDI1 Supercomplex also contains other interesting chemical elements:

Magnesium

(Mg)

206 atoms

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 12;

Binding sites:

The binding sites of Iron atom in the Dunaliella Tertiolecta Psi-Lhci-TIDI1 Supercomplex (pdb code 9mgz). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 12 binding sites of Iron where determined in the Dunaliella Tertiolecta Psi-Lhci-TIDI1 Supercomplex, PDB code: 9mgz:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Iron binding site 1 out of 12 in the Dunaliella Tertiolecta Psi-Lhci-TIDI1 Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Dunaliella Tertiolecta Psi-Lhci-TIDI1 Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe5046 b:85.9 occ:1.00 FE1 A:SF45046 0.0 85.9 1.0 SG A:CYS575 2.3 100.6 1.0 S4 A:SF45046 2.3 100.3 1.0 S2 A:SF45046 2.4 97.2 1.0 S3 A:SF45046 2.4 69.1 1.0 FE2 A:SF45046 2.7 77.0 1.0 FE3 A:SF45046 2.7 106.5 1.0 FE4 A:SF45046 2.7 78.2 1.0 CB A:CYS575 3.1 81.3 1.0 S1 A:SF45046 4.0 99.2 1.0 CD1 A:ILE720 4.1 78.8 1.0 CA A:CYS575 4.5 80.3 1.0 C B:GLY562 4.6 81.9 1.0 SG B:CYS569 4.6 89.0 1.0 N B:PRO563 4.6 78.6 1.0 SG B:CYS560 4.6 76.0 1.0 SG A:CYS584 4.6 106.2 1.0 CB B:CYS569 4.7 84.9 1.0 O B:GLY562 4.8 86.7 1.0 N A:CYS575 4.8 78.5 1.0 CB A:CYS584 4.8 88.7 1.0 CA B:PRO563 4.9 82.6 1.0 N A:GLY577 4.9 87.2 1.0 CA B:GLY562 5.0 83.0 1.0 CA A:CYS584 5.0 83.2 1.0

Iron binding site 2 out of 12 in the Dunaliella Tertiolecta Psi-Lhci-TIDI1 Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Dunaliella Tertiolecta Psi-Lhci-TIDI1 Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe5046 b:77.0 occ:1.00 FE2 A:SF45046 0.0 77.0 1.0 S4 A:SF45046 2.2 100.3 1.0 SG B:CYS560 2.3 76.0 1.0 S1 A:SF45046 2.4 99.2 1.0 S3 A:SF45046 2.4 69.1 1.0 FE1 A:SF45046 2.7 85.9 1.0 FE3 A:SF45046 2.7 106.5 1.0 FE4 A:SF45046 2.8 78.2 1.0 CB B:CYS560 2.9 74.7 1.0 CB B:CYS569 3.7 84.9 1.0 S2 A:SF45046 3.9 97.2 1.0 CA B:CYS569 4.2 82.7 1.0 CA B:CYS560 4.4 73.6 1.0 SG A:CYS584 4.4 106.2 1.0 N B:GLY562 4.5 83.0 1.0 N B:CYS569 4.5 80.1 1.0 SG A:CYS575 4.5 100.6 1.0 CA B:GLY562 4.6 83.0 1.0 SG B:CYS569 4.7 89.0 1.0 O B:GLY562 4.7 86.7 1.0 C B:GLY562 4.8 81.9 1.0 N B:CYS560 4.9 83.0 1.0 N A:PRO578 4.9 74.6 1.0

Iron binding site 3 out of 12 in the Dunaliella Tertiolecta Psi-Lhci-TIDI1 Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Dunaliella Tertiolecta Psi-Lhci-TIDI1 Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe5046 b:106.5 occ:1.00 FE3 A:SF45046 0.0 106.5 1.0 CB B:CYS569 2.1 84.9 1.0 SG B:CYS569 2.3 89.0 1.0 S2 A:SF45046 2.3 97.2 1.0 S1 A:SF45046 2.3 99.2 1.0 S4 A:SF45046 2.3 100.3 1.0 FE1 A:SF45046 2.7 85.9 1.0 FE2 A:SF45046 2.7 77.0 1.0 FE4 A:SF45046 2.7 78.2 1.0 CA B:CYS569 3.4 82.7 1.0 N B:CYS569 3.8 80.1 1.0 S3 A:SF45046 4.1 69.1 1.0 CD1 A:ILE720 4.1 78.8 1.0 CZ3 B:TRP668 4.2 87.3 1.0 CG2 A:ILE720 4.3 83.7 1.0 C B:CYS569 4.6 82.3 1.0 CB B:CYS560 4.7 74.7 1.0 CH2 B:TRP668 4.8 81.8 1.0 CG1 A:ILE720 4.8 78.9 1.0 SG B:CYS560 4.8 76.0 1.0 CE3 B:TRP668 4.9 84.4 1.0 C B:THR568 4.9 85.5 1.0 SG A:CYS575 4.9 100.6 1.0 SG A:CYS584 4.9 106.2 1.0

Iron binding site 4 out of 12 in the Dunaliella Tertiolecta Psi-Lhci-TIDI1 Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Dunaliella Tertiolecta Psi-Lhci-TIDI1 Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe5046 b:78.2 occ:1.00 FE4 A:SF45046 0.0 78.2 1.0 SG A:CYS584 2.3 106.2 1.0 S2 A:SF45046 2.3 97.2 1.0 S1 A:SF45046 2.4 99.2 1.0 S3 A:SF45046 2.4 69.1 1.0 FE1 A:SF45046 2.7 85.9 1.0 FE3 A:SF45046 2.7 106.5 1.0 FE2 A:SF45046 2.8 77.0 1.0 CB A:CYS584 2.8 88.7 1.0 CA A:CYS584 3.7 83.2 1.0 S4 A:SF45046 3.9 100.3 1.0 CE3 B:TRP668 4.2 84.4 1.0 N A:CYS584 4.3 79.5 1.0 CZ3 B:TRP668 4.3 87.3 1.0 CB A:CYS575 4.4 81.3 1.0 CB B:CYS569 4.4 84.9 1.0 SG A:CYS575 4.5 100.6 1.0 NH2 A:ARG724 4.8 84.2 1.0 SG B:CYS560 4.8 76.0 1.0 SG B:CYS569 4.9 89.0 1.0 C A:CYS584 5.0 81.8 1.0

Iron binding site 5 out of 12 in the Dunaliella Tertiolecta Psi-Lhci-TIDI1 Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of Dunaliella Tertiolecta Psi-Lhci-TIDI1 Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe101 b:90.5 occ:1.00 FE1 C:SF4101 0.0 90.5 1.0 SG C:CYS21 2.3 93.4 1.0 S4 C:SF4101 2.3 96.6 1.0 S2 C:SF4101 2.4 84.5 1.0 S3 C:SF4101 2.4 89.8 1.0 FE3 C:SF4101 2.7 93.2 1.0 FE2 C:SF4101 2.7 93.6 1.0 FE4 C:SF4101 2.8 86.3 1.0 CB C:CYS21 3.5 87.7 1.0 CG2 C:VAL25 3.8 87.1 1.0 CB C:VAL25 3.9 91.1 1.0 S1 C:SF4101 4.0 94.0 1.0 CA C:CYS21 4.0 87.0 1.0 CD C:PRO22 4.2 86.4 1.0 CD1 C:LEU26 4.5 76.8 1.0 SG C:CYS54 4.6 90.0 1.0 SG C:CYS51 4.7 89.5 1.0 N C:PRO22 4.7 85.0 1.0 C C:CYS21 4.8 86.8 1.0 CG1 C:VAL25 4.8 90.4 1.0 CB C:CYS54 4.8 84.6 1.0 SG C:CYS48 4.9 86.0 1.0 N C:VAL25 4.9 90.7 1.0

Iron binding site 6 out of 12 in the Dunaliella Tertiolecta Psi-Lhci-TIDI1 Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of Dunaliella Tertiolecta Psi-Lhci-TIDI1 Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe101 b:93.6 occ:1.00 FE2 C:SF4101 0.0 93.6 1.0 S4 C:SF4101 2.2 96.6 1.0 SG C:CYS54 2.3 90.0 1.0 S1 C:SF4101 2.4 94.0 1.0 S3 C:SF4101 2.4 89.8 1.0 FE1 C:SF4101 2.7 90.5 1.0 FE3 C:SF4101 2.7 93.2 1.0 FE4 C:SF4101 2.8 86.3 1.0 CB C:CYS54 3.3 84.6 1.0 N C:CYS54 3.7 76.4 1.0 CG2 C:VAL67 3.9 86.5 1.0 S2 C:SF4101 4.0 84.5 1.0 CA C:CYS54 4.1 77.2 1.0 N C:ARG53 4.4 83.4 1.0 N C:LYS52 4.5 83.9 1.0 CA C:LYS52 4.6 84.0 1.0 CD1 C:LEU26 4.7 76.8 1.0 SG C:CYS51 4.8 89.5 1.0 SG C:CYS21 4.8 93.4 1.0 C C:LYS52 4.8 85.9 1.0 SG C:CYS48 4.8 86.0 1.0 C C:ARG53 4.9 82.2 1.0

Iron binding site 7 out of 12 in the Dunaliella Tertiolecta Psi-Lhci-TIDI1 Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 7 of Dunaliella Tertiolecta Psi-Lhci-TIDI1 Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe101 b:93.2 occ:1.00 FE3 C:SF4101 0.0 93.2 1.0 SG C:CYS51 2.3 89.5 1.0 S1 C:SF4101 2.3 94.0 1.0 S2 C:SF4101 2.3 84.5 1.0 S4 C:SF4101 2.3 96.6 1.0 FE1 C:SF4101 2.7 90.5 1.0 FE4 C:SF4101 2.7 86.3 1.0 FE2 C:SF4101 2.7 93.6 1.0 N C:CYS51 3.7 84.6 1.0 CB C:CYS51 3.7 89.3 1.0 N C:LYS52 3.8 83.9 1.0 CD C:PRO22 3.9 86.4 1.0 N C:ARG53 4.0 83.4 1.0 S3 C:SF4101 4.0 89.8 1.0 CA C:CYS51 4.1 86.5 1.0 C C:CYS51 4.2 84.9 1.0 CB C:ARG53 4.5 83.5 1.0 SG C:CYS21 4.6 93.4 1.0 CG C:PRO22 4.6 92.5 1.0 CA C:LYS52 4.6 84.0 1.0 C C:GLY50 4.7 86.5 1.0 N C:CYS54 4.7 76.4 1.0 SG C:CYS48 4.7 86.0 1.0 N C:GLY50 4.7 89.0 1.0 SG C:CYS54 4.8 90.0 1.0 CA C:ARG53 4.8 82.1 1.0 C C:LYS52 4.8 85.9 1.0 CA C:GLY50 5.0 88.7 1.0

Iron binding site 8 out of 12 in the Dunaliella Tertiolecta Psi-Lhci-TIDI1 Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 8 of Dunaliella Tertiolecta Psi-Lhci-TIDI1 Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe101 b:86.3 occ:1.00 FE4 C:SF4101 0.0 86.3 1.0 SG C:CYS48 2.3 86.0 1.0 S2 C:SF4101 2.3 84.5 1.0 S1 C:SF4101 2.4 94.0 1.0 S3 C:SF4101 2.4 89.8 1.0 FE3 C:SF4101 2.7 93.2 1.0 FE1 C:SF4101 2.8 90.5 1.0 FE2 C:SF4101 2.8 93.6 1.0 CB C:CYS48 3.2 82.2 1.0 CA C:CYS48 3.9 76.9 1.0 S4 C:SF4101 3.9 96.6 1.0 N C:GLY50 4.0 89.0 1.0 N C:VAL49 4.2 87.9 1.0 CG2 C:VAL25 4.3 87.1 1.0 C C:CYS48 4.4 87.0 1.0 CA C:GLY50 4.5 88.7 1.0 CG1 C:VAL67 4.5 84.5 1.0 CG2 C:VAL5 4.5 86.5 1.0 N C:CYS51 4.6 84.6 1.0 CB C:VAL25 4.7 91.1 1.0 SG C:CYS51 4.8 89.5 1.0 CG2 C:VAL67 4.8 86.5 1.0 SG C:CYS21 4.9 93.4 1.0 CG1 C:VAL25 4.9 90.4 1.0 SG C:CYS54 4.9 90.0 1.0 C C:GLY50 5.0 86.5 1.0

Iron binding site 9 out of 12 in the Dunaliella Tertiolecta Psi-Lhci-TIDI1 Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 9 of Dunaliella Tertiolecta Psi-Lhci-TIDI1 Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe102 b:101.0 occ:1.00 FE1 C:SF4102 0.0 101.0 1.0 SG C:CYS14 2.3 94.8 1.0 S4 C:SF4102 2.3 84.7 1.0 S2 C:SF4102 2.4 101.3 1.0 S3 C:SF4102 2.4 107.5 1.0 FE3 C:SF4102 2.7 92.8 1.0 FE2 C:SF4102 2.7 92.0 1.0 FE4 C:SF4102 2.8 105.1 1.0 N C:CYS14 3.6 80.7 1.0 CB C:CYS14 3.6 84.9 1.0 CD C:PRO59 3.9 85.3 1.0 N C:THR15 4.0 80.3 1.0 S1 C:SF4102 4.0 98.2 1.0 CA C:CYS14 4.0 82.0 1.0 N C:GLN16 4.1 86.2 1.0 C C:CYS14 4.2 83.1 1.0 N C:CYS17 4.6 82.5 1.0 CG C:PRO59 4.6 87.1 1.0 CB C:GLN16 4.6 82.5 1.0 SG C:CYS58 4.7 98.8 1.0 N C:GLY13 4.7 77.7 1.0 SG C:CYS11 4.7 85.7 1.0 CG1 C:ILE12 4.7 81.9 1.0 C C:GLY13 4.7 84.2 1.0 SG C:CYS17 4.8 101.3 1.0 CA C:GLN16 4.9 84.7 1.0 CA C:THR15 4.9 78.6 1.0 CA C:GLY13 5.0 80.8 1.0 C C:THR15 5.0 85.4 1.0

Iron binding site 10 out of 12 in the Dunaliella Tertiolecta Psi-Lhci-TIDI1 Supercomplex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 10 of Dunaliella Tertiolecta Psi-Lhci-TIDI1 Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe102 b:92.0 occ:1.00 FE2 C:SF4102 0.0 92.0 1.0 S4 C:SF4102 2.2 84.7 1.0 SG C:CYS11 2.3 85.7 1.0 S1 C:SF4102 2.4 98.2 1.0 S3 C:SF4102 2.5 107.5 1.0 FE1 C:SF4102 2.7 101.0 1.0 FE3 C:SF4102 2.7 92.8 1.0 FE4 C:SF4102 2.8 105.1 1.0 CB C:CYS11 2.9 76.1 1.0 CA C:CYS11 3.5 77.5 1.0 N C:ILE12 3.8 79.6 1.0 N C:GLY13 3.9 77.7 1.0 S2 C:SF4102 3.9 101.3 1.0 C C:CYS11 4.0 80.2 1.0 CB C:SER64 4.4 83.5 1.0 CA C:GLY13 4.5 80.8 1.0 CB C:ALA40 4.5 89.2 1.0 N C:CYS14 4.5 80.7 1.0 SG C:CYS14 4.8 94.8 1.0 C C:ILE12 4.8 79.5 1.0 SG C:CYS58 4.8 98.8 1.0 SG C:CYS17 4.8 101.3 1.0 N C:CYS11 4.9 74.0 1.0 CA C:ILE12 4.9 78.1 1.0 OG C:SER64 4.9 87.2 1.0

H.W.Liu, R.Khera, P.Grob, S.D.Gallaher, S.O.Purvine, C.D.Nicora, M.S.Lipton, K.K.Niyogi, E.Nogales, M.Iwai, S.S.Merchant. A Distinct Lhci Arrangement Is Recruited to Photosystem I in Fe-Starved Green Algae. Proc.Natl.Acad.Sci.Usa V. 122 21122 2025.
ISSN: ESSN 1091-6490
PubMed: 40523173
DOI: 10.1073/PNAS.2500621122