Iron in PDB 9nqu: KDM6B-Nucleosome Structure Stabilized By H3K27C-UNC8015 Covalent Conjugate

All present enzymatic activity of KDM6B-Nucleosome Structure Stabilized By H3K27C-UNC8015 Covalent Conjugate:
1.14.11.68;

The structure of KDM6B-Nucleosome Structure Stabilized By H3K27C-UNC8015 Covalent Conjugate also contains other interesting chemical elements:

Zinc

(Zn)

1 atom

The binding sites of Iron atom in the KDM6B-Nucleosome Structure Stabilized By H3K27C-UNC8015 Covalent Conjugate (pdb code 9nqu). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the KDM6B-Nucleosome Structure Stabilized By H3K27C-UNC8015 Covalent Conjugate, PDB code: 9nqu:

Iron binding site 1 out of 1 in the KDM6B-Nucleosome Structure Stabilized By H3K27C-UNC8015 Covalent Conjugate


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of KDM6B-Nucleosome Structure Stabilized By H3K27C-UNC8015 Covalent Conjugate within 5.0Å range: probe atom residue distance (Å) B Occ K:Fe1701 b:81.1 occ:1.00 OE2 K:GLU1390 2.0 63.4 1.0 NE2 K:HIS1388 2.1 46.8 1.0 OE1 K:GLU1390 2.2 65.9 1.0 NE2 K:HIS1468 2.2 38.5 1.0 CD K:GLU1390 2.3 64.8 1.0 CD2 K:HIS1468 2.4 42.5 1.0 CD2 K:HIS1388 2.6 51.5 1.0 CE1 K:HIS1388 2.7 44.5 1.0 CG K:HIS1388 3.3 43.6 1.0 ND1 K:HIS1388 3.3 40.4 1.0 CE1 K:HIS1468 3.5 47.2 1.0 O K:HIS1388 3.6 50.9 1.0 N K:GLU1390 3.7 60.8 1.0 CG K:HIS1468 3.7 43.3 1.0 CG K:GLU1390 3.7 68.0 1.0 C K:HIS1388 4.0 47.9 1.0 C K:GLN1389 4.2 55.7 1.0 ND1 K:HIS1468 4.2 43.1 1.0 O3 K:OH01703 4.2 49.5 1.0 CA K:GLU1390 4.2 67.1 1.0 CA K:GLN1389 4.4 47.0 1.0 O K:HIS1468 4.4 50.7 1.0 CB K:GLU1390 4.4 66.2 1.0 N K:GLN1389 4.5 49.1 1.0 CB K:HIS1388 4.5 39.4 1.0 N K:HIS1468 4.7 40.0 1.0 C6 K:OH01703 4.7 54.5 1.0 CA K:HIS1388 4.7 43.2 1.0 O K:THR1466 4.8 58.1 1.0 CB K:HIS1468 4.9 47.0 1.0 N K:HIS1388 5.0 40.2 1.0

C.-C.Lin, R.K.Mcginty. Structural Mechanism of H3K27 Demethylation and Crosstalk with Heterochromatin Markers Mol.Cell 2025.
ISSN: ISSN 1097-2765