Atomistry » Iron » PDB 101m-1a8f » 1a6m
Atomistry »
  Iron »
    PDB 101m-1a8f »
      1a6m »

Iron in PDB 1a6m: Oxy-Myoglobin, Atomic Resolution

Protein crystallography data

The structure of Oxy-Myoglobin, Atomic Resolution, PDB code: 1a6m was solved by J.Vojtechovsky, K.Chu, J.Berendzen, R.M.Sweet, I.Schlichting, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 8.00 / 1.00
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 63.800, 30.810, 34.350, 90.00, 105.80, 90.00
R / Rfree (%) 12.2 / 15.9

Iron Binding Sites:

The binding sites of Iron atom in the Oxy-Myoglobin, Atomic Resolution (pdb code 1a6m). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Oxy-Myoglobin, Atomic Resolution, PDB code: 1a6m:

Iron binding site 1 out of 1 in 1a6m

Go back to Iron Binding Sites List in 1a6m
Iron binding site 1 out of 1 in the Oxy-Myoglobin, Atomic Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Oxy-Myoglobin, Atomic Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe154

b:6.9
occ:1.00
FE A:HEM154 0.0 6.9 1.0
O1 A:OXY157 1.8 8.7 1.0
NB A:HEM154 2.0 6.8 1.0
NA A:HEM154 2.0 7.4 1.0
NC A:HEM154 2.0 7.0 1.0
ND A:HEM154 2.0 7.4 1.0
NE2 A:HIS93 2.1 7.3 1.0
O2 A:OXY157 2.7 13.8 1.0
CE1 A:HIS93 3.0 9.1 1.0
C4C A:HEM154 3.0 6.9 1.0
C1A A:HEM154 3.0 7.9 1.0
C4B A:HEM154 3.0 6.7 1.0
C1B A:HEM154 3.0 7.0 1.0
C1D A:HEM154 3.0 7.7 1.0
C4D A:HEM154 3.0 8.0 1.0
C1C A:HEM154 3.1 7.0 1.0
C4A A:HEM154 3.1 7.5 1.0
CD2 A:HIS93 3.1 7.3 1.0
CHD A:HEM154 3.4 7.6 1.0
CHA A:HEM154 3.4 7.9 1.0
CHC A:HEM154 3.4 6.9 1.0
CHB A:HEM154 3.4 7.3 1.0
ND1 A:HIS93 4.2 9.0 1.0
C3C A:HEM154 4.2 7.3 1.0
CG A:HIS93 4.3 7.7 1.0
C2D A:HEM154 4.3 8.5 1.0
C3D A:HEM154 4.3 8.7 1.0
C2C A:HEM154 4.3 7.2 1.0
C3A A:HEM154 4.3 8.3 1.0
C3B A:HEM154 4.3 6.9 1.0
C2B A:HEM154 4.3 6.9 1.0
C2A A:HEM154 4.3 8.1 1.0
NE2 A:HIS64 4.6 8.0 0.5
CE1 A:HIS64 4.6 6.2 0.5
NE2 A:HIS64 4.7 6.9 0.5
CG2 A:VAL68 4.7 7.0 1.0
CE1 A:HIS64 4.9 7.2 0.5

Reference:

J.Vojtechovsky, K.Chu, J.Berendzen, R.M.Sweet, I.Schlichting. Crystal Structures of Myoglobin-Ligand Complexes at Near-Atomic Resolution. Biophys.J. V. 77 2153 1999.
ISSN: ISSN 0006-3495
PubMed: 10512835
Page generated: Sat Aug 3 02:01:41 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy