Iron in PDB 1a7v: Cytochrome C' From Rhodopseudomonas Palustris

The structure of Cytochrome C' From Rhodopseudomonas Palustris, PDB code: 1a7v was solved by N.Shibata, S.Iba, S.Misaki, T.E.Meyer, R.G.Bartsch, M.A.Cusanovich, Y.Higuchi, N.Yasuoka, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	7.00 / 2.30
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	63.000, 113.500, 34.500, 90.00, 90.00, 90.00
R / Rfree (%)	19.4 / 24.1

The binding sites of Iron atom in the Cytochrome C' From Rhodopseudomonas Palustris (pdb code 1a7v). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Cytochrome C' From Rhodopseudomonas Palustris, PDB code: 1a7v:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the Cytochrome C' From Rhodopseudomonas Palustris


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cytochrome C' From Rhodopseudomonas Palustris within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe150 b:9.9 occ:1.00 FE A:HEM150 0.0 9.9 1.0 NE2 A:HIS117 1.9 14.8 1.0 NB A:HEM150 2.0 9.2 1.0 NA A:HEM150 2.0 13.8 1.0 NC A:HEM150 2.1 12.8 1.0 ND A:HEM150 2.1 12.6 1.0 CE1 A:HIS117 2.9 15.4 1.0 CD2 A:HIS117 3.0 14.5 1.0 C4B A:HEM150 3.0 7.8 1.0 C1B A:HEM150 3.0 9.0 1.0 C4A A:HEM150 3.0 15.9 1.0 C4C A:HEM150 3.1 10.4 1.0 C1C A:HEM150 3.1 8.4 1.0 C1A A:HEM150 3.1 16.1 1.0 C1D A:HEM150 3.1 12.2 1.0 C4D A:HEM150 3.1 15.2 1.0 CHB A:HEM150 3.4 10.7 1.0 CHC A:HEM150 3.4 7.8 1.0 CHD A:HEM150 3.4 10.7 1.0 CHA A:HEM150 3.4 15.3 1.0 CD2 A:LEU12 3.6 10.5 1.0 ND1 A:HIS117 4.0 17.3 1.0 CG A:HIS117 4.1 18.5 1.0 C3B A:HEM150 4.2 7.4 1.0 C2B A:HEM150 4.2 6.8 1.0 C3A A:HEM150 4.2 17.0 1.0 C3C A:HEM150 4.2 8.5 1.0 C2A A:HEM150 4.3 16.2 1.0 C2C A:HEM150 4.3 5.4 1.0 C2D A:HEM150 4.3 13.2 1.0 C3D A:HEM150 4.3 13.8 1.0 CG A:LEU12 4.6 12.7 1.0 CD1 A:LEU12 4.7 15.8 1.0 CE A:MET15 4.7 29.4 1.0 CB A:LEU12 4.9 12.1 1.0

Iron binding site 2 out of 2 in the Cytochrome C' From Rhodopseudomonas Palustris


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Cytochrome C' From Rhodopseudomonas Palustris within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe150 b:14.4 occ:1.00 FE B:HEM150 0.0 14.4 1.0 NE2 B:HIS117 1.9 20.9 1.0 NA B:HEM150 2.0 21.8 1.0 ND B:HEM150 2.0 18.6 1.0 NB B:HEM150 2.1 14.4 1.0 NC B:HEM150 2.1 16.0 1.0 CE1 B:HIS117 2.9 24.4 1.0 CD2 B:HIS117 3.0 23.6 1.0 C1A B:HEM150 3.0 20.5 1.0 C4A B:HEM150 3.0 22.0 1.0 C4D B:HEM150 3.0 20.1 1.0 C1D B:HEM150 3.0 17.6 1.0 C1B B:HEM150 3.1 14.5 1.0 C4C B:HEM150 3.1 14.7 1.0 C4B B:HEM150 3.1 12.2 1.0 C1C B:HEM150 3.1 10.5 1.0 CHA B:HEM150 3.4 17.9 1.0 CHB B:HEM150 3.4 16.0 1.0 CHD B:HEM150 3.4 11.5 1.0 CHC B:HEM150 3.4 9.8 1.0 CD2 B:LEU12 3.6 13.1 1.0 ND1 B:HIS117 4.0 23.1 1.0 CG B:HIS117 4.1 23.5 1.0 C2A B:HEM150 4.2 21.5 1.0 C3A B:HEM150 4.2 22.2 1.0 C3D B:HEM150 4.2 23.1 1.0 C2D B:HEM150 4.2 20.5 1.0 C3B B:HEM150 4.3 10.6 1.0 C3C B:HEM150 4.3 12.3 1.0 C2B B:HEM150 4.3 11.4 1.0 C2C B:HEM150 4.3 10.4 1.0 CG B:LEU12 4.6 15.2 1.0 CD1 B:LEU12 4.8 17.4 1.0 CE B:MET15 4.9 37.6 1.0 CB B:LEU12 4.9 12.5 1.0

N.Shibata, S.Iba, S.Misaki, T.E.Meyer, R.G.Bartsch, M.A.Cusanovich, Y.Morimoto, Y.Higuchi, N.Yasuoka. Basis For Monomer Stabilization in Rhodopseudomonas Palustris Cytochrome C' Derived From the Crystal Structure. J.Mol.Biol. V. 284 751 1998.
ISSN: ISSN 0022-2836
PubMed: 9826513
DOI: 10.1006/JMBI.1998.2190