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Iron in PDB 1bbb: A Third Quaternary Structure of Human Hemoglobin A at 1.7-Angstroms Resolution

Protein crystallography data

The structure of A Third Quaternary Structure of Human Hemoglobin A at 1.7-Angstroms Resolution, PDB code: 1bbb was solved by A.Arnone, M.M.Silva, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) N/A / 1.70
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 97.500, 101.500, 61.100, 90.00, 90.00, 90.00
R / Rfree (%) n/a / n/a

Iron Binding Sites:

The binding sites of Iron atom in the A Third Quaternary Structure of Human Hemoglobin A at 1.7-Angstroms Resolution (pdb code 1bbb). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the A Third Quaternary Structure of Human Hemoglobin A at 1.7-Angstroms Resolution, PDB code: 1bbb:
Jump to Iron binding site number: 1; 2; 3; 4;

Iron binding site 1 out of 4 in 1bbb

Go back to Iron Binding Sites List in 1bbb
Iron binding site 1 out of 4 in the A Third Quaternary Structure of Human Hemoglobin A at 1.7-Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of A Third Quaternary Structure of Human Hemoglobin A at 1.7-Angstroms Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe142

b:14.3
occ:1.00
FE A:HEM142 0.0 14.3 1.0
C A:CMO143 1.8 16.8 1.0
ND A:HEM142 2.0 12.0 1.0
NB A:HEM142 2.0 11.8 1.0
NC A:HEM142 2.0 11.5 1.0
NA A:HEM142 2.0 12.4 1.0
NE2 A:HIS87 2.1 11.6 1.0
O A:CMO143 2.9 17.6 1.0
CE1 A:HIS87 3.0 12.5 1.0
C4D A:HEM142 3.0 14.7 1.0
C1D A:HEM142 3.0 13.9 1.0
C4B A:HEM142 3.0 11.1 1.0
C1C A:HEM142 3.0 12.1 1.0
C1B A:HEM142 3.0 15.2 1.0
C1A A:HEM142 3.0 12.5 1.0
C4C A:HEM142 3.1 14.5 1.0
C4A A:HEM142 3.1 14.7 1.0
CD2 A:HIS87 3.1 12.9 1.0
CHB A:HEM142 3.4 14.2 1.0
CHA A:HEM142 3.4 16.7 1.0
CHC A:HEM142 3.4 13.7 1.0
CHD A:HEM142 3.4 13.4 1.0
ND1 A:HIS87 4.2 13.4 1.0
CG A:HIS87 4.2 14.0 1.0
C3D A:HEM142 4.2 13.7 1.0
C2D A:HEM142 4.2 14.2 1.0
C2B A:HEM142 4.3 17.7 1.0
C2C A:HEM142 4.3 14.5 1.0
C3B A:HEM142 4.3 13.7 1.0
C3C A:HEM142 4.3 13.2 1.0
C2A A:HEM142 4.3 15.7 1.0
C3A A:HEM142 4.3 15.9 1.0
NE2 A:HIS58 4.5 21.1 1.0
CG2 A:VAL62 4.8 15.2 1.0

Iron binding site 2 out of 4 in 1bbb

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Iron binding site 2 out of 4 in the A Third Quaternary Structure of Human Hemoglobin A at 1.7-Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of A Third Quaternary Structure of Human Hemoglobin A at 1.7-Angstroms Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe147

b:14.3
occ:1.00
FE B:HEM147 0.0 14.3 1.0
C B:CMO148 1.8 20.3 1.0
ND B:HEM147 2.0 14.9 1.0
NB B:HEM147 2.0 10.7 1.0
NA B:HEM147 2.0 13.5 1.0
NC B:HEM147 2.0 10.9 1.0
NE2 B:HIS92 2.1 10.6 1.0
O B:CMO148 2.9 22.2 1.0
C1A B:HEM147 3.0 12.7 1.0
C4C B:HEM147 3.0 12.5 1.0
C4A B:HEM147 3.0 12.5 1.0
C4B B:HEM147 3.0 11.1 1.0
C1D B:HEM147 3.0 14.7 1.0
C1C B:HEM147 3.0 13.1 1.0
C1B B:HEM147 3.1 10.7 1.0
C4D B:HEM147 3.1 16.8 1.0
CE1 B:HIS92 3.1 18.2 1.0
CD2 B:HIS92 3.1 14.7 1.0
CHA B:HEM147 3.4 15.8 1.0
CHB B:HEM147 3.4 13.7 1.0
CHC B:HEM147 3.4 10.4 1.0
CHD B:HEM147 3.4 12.9 1.0
ND1 B:HIS92 4.2 15.2 1.0
C2A B:HEM147 4.2 17.8 1.0
CG B:HIS92 4.2 19.0 1.0
C3A B:HEM147 4.3 12.2 1.0
C2D B:HEM147 4.3 14.0 1.0
C3C B:HEM147 4.3 12.7 1.0
C3D B:HEM147 4.3 18.5 1.0
C2C B:HEM147 4.3 12.4 1.0
C2B B:HEM147 4.3 12.4 1.0
C3B B:HEM147 4.3 14.2 1.0
NE2 B:HIS63 4.5 24.2 1.0
CG2 B:VAL67 4.9 13.7 1.0

Iron binding site 3 out of 4 in 1bbb

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Iron binding site 3 out of 4 in the A Third Quaternary Structure of Human Hemoglobin A at 1.7-Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of A Third Quaternary Structure of Human Hemoglobin A at 1.7-Angstroms Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe142

b:14.4
occ:1.00
FE C:HEM142 0.0 14.4 1.0
C C:CMO143 1.8 18.3 1.0
ND C:HEM142 2.0 12.3 1.0
NB C:HEM142 2.0 14.4 1.0
NA C:HEM142 2.0 12.3 1.0
NC C:HEM142 2.0 11.7 1.0
NE2 C:HIS87 2.1 14.0 1.0
O C:CMO143 2.9 16.9 1.0
CE1 C:HIS87 3.0 15.0 1.0
C4D C:HEM142 3.0 14.2 1.0
C1A C:HEM142 3.0 11.6 1.0
C1C C:HEM142 3.0 10.7 1.0
C1D C:HEM142 3.0 13.9 1.0
C4B C:HEM142 3.0 12.0 1.0
C4C C:HEM142 3.1 11.8 1.0
C4A C:HEM142 3.1 12.8 1.0
C1B C:HEM142 3.1 13.3 1.0
CD2 C:HIS87 3.2 15.5 1.0
CHA C:HEM142 3.4 13.3 1.0
CHC C:HEM142 3.4 13.2 1.0
CHD C:HEM142 3.4 10.9 1.0
CHB C:HEM142 3.5 10.7 1.0
ND1 C:HIS87 4.2 16.9 1.0
C3D C:HEM142 4.2 15.6 1.0
C2D C:HEM142 4.3 14.7 1.0
C2A C:HEM142 4.3 14.5 1.0
C2C C:HEM142 4.3 12.9 1.0
CG C:HIS87 4.3 15.1 1.0
C3B C:HEM142 4.3 11.2 1.0
C3A C:HEM142 4.3 12.8 1.0
C3C C:HEM142 4.3 12.2 1.0
C2B C:HEM142 4.3 12.1 1.0
NE2 C:HIS58 4.5 19.4 1.0
CG2 C:VAL62 5.0 14.3 1.0

Iron binding site 4 out of 4 in 1bbb

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Iron binding site 4 out of 4 in the A Third Quaternary Structure of Human Hemoglobin A at 1.7-Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of A Third Quaternary Structure of Human Hemoglobin A at 1.7-Angstroms Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Fe147

b:15.5
occ:1.00
FE D:HEM147 0.0 15.5 1.0
C D:CMO148 1.8 15.5 1.0
ND D:HEM147 2.0 18.2 1.0
NB D:HEM147 2.0 13.7 1.0
NA D:HEM147 2.0 15.1 1.0
NC D:HEM147 2.0 11.3 1.0
NE2 D:HIS92 2.1 14.3 1.0
O D:CMO148 2.9 19.1 1.0
C1D D:HEM147 3.0 22.6 1.0
C4B D:HEM147 3.0 15.2 1.0
C4C D:HEM147 3.0 14.6 1.0
CE1 D:HIS92 3.0 17.6 1.0
C1A D:HEM147 3.0 16.6 1.0
C4A D:HEM147 3.0 16.0 1.0
C1C D:HEM147 3.0 10.8 1.0
C4D D:HEM147 3.0 22.6 1.0
C1B D:HEM147 3.1 14.0 1.0
CD2 D:HIS92 3.2 14.6 1.0
CHA D:HEM147 3.4 19.6 1.0
CHC D:HEM147 3.4 14.9 1.0
CHD D:HEM147 3.4 17.3 1.0
CHB D:HEM147 3.4 13.3 1.0
ND1 D:HIS92 4.2 16.9 1.0
C2D D:HEM147 4.2 25.6 1.0
C2A D:HEM147 4.3 18.4 1.0
C3D D:HEM147 4.3 25.6 1.0
C3A D:HEM147 4.3 18.3 1.0
CG D:HIS92 4.3 13.4 1.0
C2B D:HEM147 4.3 16.4 1.0
C3B D:HEM147 4.3 17.2 1.0
C3C D:HEM147 4.3 13.4 1.0
C2C D:HEM147 4.3 11.3 1.0
NE2 D:HIS63 4.5 21.6 1.0
CG2 D:VAL67 5.0 12.5 1.0

Reference:

M.M.Silva, P.H.Rogers, A.Arnone. A Third Quaternary Structure of Human Hemoglobin A at 1.7-A Resolution. J.Biol.Chem. V. 267 17248 1992.
ISSN: ISSN 0021-9258
PubMed: 1512262
Page generated: Sun Dec 13 14:07:38 2020

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