Iron binding site 1 out of 8 in 1bgy
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Iron in the PDB 1bgy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Iron atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: C: Gly48, C: His83, C: His182, C: Hem380, |
conact list:
Atom | Atom | Distance (A) | Fe | CA C:Gly48 | 4.98 | Fe | NE2 C:His83 | 2.05 | Fe | ND1 C:His83 | 3.89 | Fe | CD2 C:His83 | 3.32 | Fe | CE1 C:His83 | 2.64 | Fe | CG C:His83 | 4.24 | Fe | NE2 C:His182 | 2.07 | Fe | ND1 C:His182 | 4.00 | Fe | CD2 C:His182 | 3.28 | Fe | CE1 C:His182 | 2.78 | Fe | CG C:His182 | 4.29 | Fe | C2D C:Hem380 | 4.32 | Fe | NC C:Hem380 | 2.01 | Fe | CHB C:Hem380 | 3.44 | Fe | CHC C:Hem380 | 3.45 | Fe | C3D C:Hem380 | 4.30 | Fe | NA C:Hem380 | 1.99 | Fe | CHA C:Hem380 | 3.37 | Fe | C2A C:Hem380 | 4.25 | Fe | C1D C:Hem380 | 3.07 | Fe | C4A C:Hem380 | 3.03 | Fe | C4B C:Hem380 | 3.07 | Fe | C3A C:Hem380 | 4.24 | Fe | C4C C:Hem380 | 3.03 | Fe | C2B C:Hem380 | 4.32 | Fe | C1C C:Hem380 | 3.03 | Fe | C2C C:Hem380 | 4.24 | Fe | ND C:Hem380 | 2.02 | Fe | CHD C:Hem380 | 3.43 | Fe | C1B C:Hem380 | 3.07 | Fe | NB C:Hem380 | 2.04 | Fe | FE C:Hem380 | 0.00 | Fe | C3C C:Hem380 | 4.26 | Fe | C3B C:Hem380 | 4.29 | Fe | C4D C:Hem380 | 3.06 | Fe | C1A C:Hem380 | 3.02 |
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Iron binding site 2 out of 8 in 1bgy
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Iron in the PDB 1bgy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Iron atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: C: Leu37, C: His97, C: His196, C: Hem381, |
conact list:
Atom | Atom | Distance (A) | Fe | CD1 C:Leu37 | 4.62 | Fe | NE2 C:His97 | 2.05 | Fe | ND1 C:His97 | 4.23 | Fe | CD2 C:His97 | 2.89 | Fe | CE1 C:His97 | 3.23 | Fe | CG C:His97 | 4.15 | Fe | NE2 C:His196 | 2.18 | Fe | ND1 C:His196 | 4.13 | Fe | CD2 C:His196 | 3.32 | Fe | CE1 C:His196 | 2.95 | Fe | CG C:His196 | 4.36 | Fe | C2D C:Hem381 | 4.23 | Fe | NC C:Hem381 | 2.02 | Fe | CHB C:Hem381 | 3.29 | Fe | CHC C:Hem381 | 3.41 | Fe | C3D C:Hem381 | 4.25 | Fe | NA C:Hem381 | 1.98 | Fe | CHA C:Hem381 | 3.38 | Fe | C2A C:Hem381 | 4.20 | Fe | C1D C:Hem381 | 3.02 | Fe | C4A C:Hem381 | 3.01 | Fe | C4B C:Hem381 | 3.07 | Fe | C3A C:Hem381 | 4.20 | Fe | C4C C:Hem381 | 3.08 | Fe | C2B C:Hem381 | 4.27 | Fe | C1C C:Hem381 | 3.10 | Fe | C2C C:Hem381 | 4.39 | Fe | ND C:Hem381 | 2.01 | Fe | CHD C:Hem381 | 3.42 | Fe | C1B C:Hem381 | 3.04 | Fe | NB C:Hem381 | 2.01 | Fe | FE C:Hem381 | 0.00 | Fe | C3C C:Hem381 | 4.34 | Fe | C3B C:Hem381 | 4.29 | Fe | C4D C:Hem381 | 3.04 | Fe | C1A C:Hem381 | 3.00 |
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Iron binding site 3 out of 8 in 1bgy
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 3 of Iron in the PDB 1bgy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Iron atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: D: His41, D: Met160, D: Hec242, |
conact list:
Atom | Atom | Distance (A) | Fe | NE2 D:His41 | 1.92 | Fe | ND1 D:His41 | 3.78 | Fe | CD2 D:His41 | 3.15 | Fe | CE1 D:His41 | 2.53 | Fe | CG D:His41 | 4.09 | Fe | CB D:Met160 | 4.93 | Fe | CE D:Met160 | 3.59 | Fe | CG D:Met160 | 3.80 | Fe | SD D:Met160 | 2.36 | Fe | C2D D:Hec242 | 4.26 | Fe | NC D:Hec242 | 2.00 | Fe | CHB D:Hec242 | 3.40 | Fe | CHC D:Hec242 | 3.39 | Fe | C3D D:Hec242 | 4.26 | Fe | NA D:Hec242 | 2.01 | Fe | CHA D:Hec242 | 3.41 | Fe | C2A D:Hec242 | 4.21 | Fe | C1D D:Hec242 | 3.04 | Fe | C4A D:Hec242 | 3.03 | Fe | C4B D:Hec242 | 3.03 | Fe | C3A D:Hec242 | 4.23 | Fe | C4C D:Hec242 | 3.03 | Fe | C2B D:Hec242 | 4.25 | Fe | C1C D:Hec242 | 3.03 | Fe | C2C D:Hec242 | 4.24 | Fe | ND D:Hec242 | 2.01 | Fe | CHD D:Hec242 | 3.40 | Fe | C1B D:Hec242 | 3.03 | Fe | NB D:Hec242 | 2.00 | Fe | FE D:Hec242 | 0.00 | Fe | C3C D:Hec242 | 4.23 | Fe | C3B D:Hec242 | 4.25 | Fe | C4D D:Hec242 | 3.04 | Fe | C1A D:Hec242 | 3.02 |
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Iron binding site 4 out of 8 in 1bgy
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 4 of Iron in the PDB 1bgy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Iron atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: O: Gly48, O: His83, O: His182, O: Hem380, |
conact list:
Atom | Atom | Distance (A) | Fe | CA O:Gly48 | 5.00 | Fe | NE2 O:His83 | 2.12 | Fe | ND1 O:His83 | 4.01 | Fe | CD2 O:His83 | 3.39 | Fe | CE1 O:His83 | 2.76 | Fe | CG O:His83 | 4.36 | Fe | NE2 O:His182 | 2.03 | Fe | ND1 O:His182 | 3.89 | Fe | CD2 O:His182 | 3.24 | Fe | CE1 O:His182 | 2.69 | Fe | CG O:His182 | 4.19 | Fe | C2D O:Hem380 | 4.28 | Fe | NC O:Hem380 | 1.99 | Fe | CHB O:Hem380 | 3.39 | Fe | CHC O:Hem380 | 3.44 | Fe | C3D O:Hem380 | 4.31 | Fe | NA O:Hem380 | 2.02 | Fe | CHA O:Hem380 | 3.41 | Fe | C2A O:Hem380 | 4.34 | Fe | C1D O:Hem380 | 3.02 | Fe | C4A O:Hem380 | 3.03 | Fe | C4B O:Hem380 | 3.11 | Fe | C3A O:Hem380 | 4.28 | Fe | C4C O:Hem380 | 3.00 | Fe | C2B O:Hem380 | 4.41 | Fe | C1C O:Hem380 | 3.06 | Fe | C2C O:Hem380 | 4.23 | Fe | ND O:Hem380 | 2.00 | Fe | CHD O:Hem380 | 3.35 | Fe | C1B O:Hem380 | 3.11 | Fe | NB O:Hem380 | 2.04 | Fe | FE O:Hem380 | 0.00 | Fe | C3C O:Hem380 | 4.23 | Fe | C3B O:Hem380 | 4.34 | Fe | C4D O:Hem380 | 3.09 | Fe | C1A O:Hem380 | 3.09 |
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Iron binding site 5 out of 8 in 1bgy
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 5 of Iron in the PDB 1bgy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Iron atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: O: Leu37, O: His97, O: His196, O: Hem381, |
conact list:
Atom | Atom | Distance (A) | Fe | CD1 O:Leu37 | 4.61 | Fe | NE2 O:His97 | 2.06 | Fe | ND1 O:His97 | 4.21 | Fe | CD2 O:His97 | 2.83 | Fe | CE1 O:His97 | 3.20 | Fe | CG O:His97 | 4.08 | Fe | NE2 O:His196 | 2.10 | Fe | ND1 O:His196 | 4.18 | Fe | CD2 O:His196 | 3.25 | Fe | CE1 O:His196 | 3.00 | Fe | CG O:His196 | 4.34 | Fe | C2D O:Hem381 | 4.24 | Fe | NC O:Hem381 | 2.06 | Fe | CHB O:Hem381 | 3.35 | Fe | CHC O:Hem381 | 3.44 | Fe | C3D O:Hem381 | 4.25 | Fe | NA O:Hem381 | 2.06 | Fe | CHA O:Hem381 | 3.39 | Fe | C2A O:Hem381 | 4.27 | Fe | C1D O:Hem381 | 3.01 | Fe | C4A O:Hem381 | 3.03 | Fe | C4B O:Hem381 | 3.02 | Fe | C3A O:Hem381 | 4.23 | Fe | C4C O:Hem381 | 3.06 | Fe | C2B O:Hem381 | 4.25 | Fe | C1C O:Hem381 | 3.07 | Fe | C2C O:Hem381 | 4.28 | Fe | ND O:Hem381 | 1.97 | Fe | CHD O:Hem381 | 3.39 | Fe | C1B O:Hem381 | 3.07 | Fe | NB O:Hem381 | 2.02 | Fe | FE O:Hem381 | 0.00 | Fe | C3C O:Hem381 | 4.26 | Fe | C3B O:Hem381 | 4.27 | Fe | C4D O:Hem381 | 3.03 | Fe | C1A O:Hem381 | 3.12 |
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Iron binding site 6 out of 8 in 1bgy
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 6 of Iron in the PDB 1bgy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Iron atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: P: His41, P: Met160, P: Hec242, |
conact list:
Atom | Atom | Distance (A) | Fe | NE2 P:His41 | 1.96 | Fe | ND1 P:His41 | 3.89 | Fe | CD2 P:His41 | 3.15 | Fe | CE1 P:His41 | 2.67 | Fe | CG P:His41 | 4.14 | Fe | CB P:Met160 | 4.93 | Fe | CE P:Met160 | 3.80 | Fe | CG P:Met160 | 3.68 | Fe | SD P:Met160 | 2.35 | Fe | C2D P:Hec242 | 4.28 | Fe | NC P:Hec242 | 2.01 | Fe | CHB P:Hec242 | 3.37 | Fe | CHC P:Hec242 | 3.39 | Fe | C3D P:Hec242 | 4.28 | Fe | NA P:Hec242 | 1.98 | Fe | CHA P:Hec242 | 3.39 | Fe | C2A P:Hec242 | 4.19 | Fe | C1D P:Hec242 | 3.06 | Fe | C4A P:Hec242 | 2.99 | Fe | C4B P:Hec242 | 3.02 | Fe | C3A P:Hec242 | 4.19 | Fe | C4C P:Hec242 | 3.03 | Fe | C2B P:Hec242 | 4.23 | Fe | C1C P:Hec242 | 3.04 | Fe | C2C P:Hec242 | 4.26 | Fe | ND P:Hec242 | 2.02 | Fe | CHD P:Hec242 | 3.42 | Fe | C1B P:Hec242 | 3.01 | Fe | NB P:Hec242 | 1.98 | Fe | FE P:Hec242 | 0.00 | Fe | C3C P:Hec242 | 4.24 | Fe | C3B P:Hec242 | 4.24 | Fe | C4D P:Hec242 | 3.04 | Fe | C1A P:Hec242 | 3.00 |
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Iron binding site 7 out of 8 in 1bgy
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 7 of Iron in the PDB 1bgy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Iron atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: Q: Cys139, Q: His141, Q: Leu142, Q: Gly143, Q: Cys144, Q: Cys158, Q: Cys160, Q: His161, Q: Ser163, Q: Fes197, |
conact list:
Atom | Atom | Distance (A) | Fe | CB Q:Cys139 | 3.41 | Fe | SG Q:Cys139 | 2.29 | Fe | CA Q:Cys139 | 4.75 | Fe | CB Q:His141 | 3.97 | Fe | ND1 Q:His141 | 4.35 | Fe | CG Q:His141 | 4.65 | Fe | N Q:Leu142 | 4.68 | Fe | N Q:Gly143 | 4.75 | Fe | O Q:Cys144 | 4.18 | Fe | N Q:Cys144 | 4.81 | Fe | SG Q:Cys144 | 4.98 | Fe | O Q:Cys158 | 4.36 | Fe | CB Q:Cys158 | 3.22 | Fe | SG Q:Cys158 | 2.18 | Fe | C Q:Cys158 | 4.72 | Fe | CA Q:Cys158 | 4.57 | Fe | CB Q:Cys160 | 4.09 | Fe | CA Q:Cys160 | 4.89 | Fe | N Q:His161 | 4.68 | Fe | ND1 Q:His161 | 4.58 | Fe | CB Q:Ser163 | 4.86 | Fe | OG Q:Ser163 | 4.98 | Fe | S1 Q:Fes197 | 2.33 | Fe | S2 Q:Fes197 | 2.35 | Fe | FE1 Q:Fes197 | 0.00 | Fe | FE2 Q:Fes197 | 2.71 |
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Iron binding site 8 out of 8 in 1bgy
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 8 of Iron in the PDB 1bgy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Iron atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: Q: Cys139, Q: His141, Q: Leu142, Q: Cys158, Q: Cys160, Q: His161, Q: Ser163, Q: Fes197, |
conact list:
Atom | Atom | Distance (A) | Fe | SG Q:Cys139 | 4.11 | Fe | NE2 Q:His141 | 4.29 | Fe | CB Q:His141 | 3.34 | Fe | ND1 Q:His141 | 2.17 | Fe | CD2 Q:His141 | 4.26 | Fe | C Q:His141 | 4.95 | Fe | CE1 Q:His141 | 3.21 | Fe | CG Q:His141 | 3.10 | Fe | CA Q:His141 | 4.77 | Fe | N Q:Leu142 | 4.18 | Fe | CB Q:Leu142 | 4.67 | Fe | CG Q:Leu142 | 4.89 | Fe | CA Q:Leu142 | 4.99 | Fe | SG Q:Cys158 | 4.10 | Fe | O Q:Cys160 | 4.70 | Fe | CB Q:Cys160 | 4.23 | Fe | C Q:Cys160 | 4.31 | Fe | CA Q:Cys160 | 4.86 | Fe | NE2 Q:His161 | 4.23 | Fe | N Q:His161 | 3.91 | Fe | CB Q:His161 | 3.14 | Fe | ND1 Q:His161 | 2.14 | Fe | CD2 Q:His161 | 4.18 | Fe | C Q:His161 | 4.95 | Fe | CE1 Q:His161 | 3.19 | Fe | CG Q:His161 | 3.00 | Fe | CA Q:His161 | 4.11 | Fe | OG Q:Ser163 | 4.86 | Fe | S1 Q:Fes197 | 2.25 | Fe | S2 Q:Fes197 | 2.32 | Fe | FE1 Q:Fes197 | 2.71 | Fe | FE2 Q:Fes197 | 0.00 |
| interactive model:
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