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Iron in PDB 1c53: S-Class Cytochromes C Have A Variety of Folding Patterns: Structure of Cytochrome C-553 From Desulfovibrio Vulgaris Determined By the Multi-Wavelength Anomalous Dispersion Method

Protein crystallography data

The structure of S-Class Cytochromes C Have A Variety of Folding Patterns: Structure of Cytochrome C-553 From Desulfovibrio Vulgaris Determined By the Multi-Wavelength Anomalous Dispersion Method, PDB code: 1c53 was solved by A.Nakagawa, Y.Higuchi, N.Yasuoka, Y.Katsube, T.Yaga, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 1.80
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 42.700, 42.700, 103.400, 90.00, 90.00, 90.00
R / Rfree (%) n/a / n/a

Iron Binding Sites:

The binding sites of Iron atom in the S-Class Cytochromes C Have A Variety of Folding Patterns: Structure of Cytochrome C-553 From Desulfovibrio Vulgaris Determined By the Multi-Wavelength Anomalous Dispersion Method (pdb code 1c53). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the S-Class Cytochromes C Have A Variety of Folding Patterns: Structure of Cytochrome C-553 From Desulfovibrio Vulgaris Determined By the Multi-Wavelength Anomalous Dispersion Method, PDB code: 1c53:

Iron binding site 1 out of 1 in 1c53

Go back to Iron Binding Sites List in 1c53
Iron binding site 1 out of 1 in the S-Class Cytochromes C Have A Variety of Folding Patterns: Structure of Cytochrome C-553 From Desulfovibrio Vulgaris Determined By the Multi-Wavelength Anomalous Dispersion Method


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of S-Class Cytochromes C Have A Variety of Folding Patterns: Structure of Cytochrome C-553 From Desulfovibrio Vulgaris Determined By the Multi-Wavelength Anomalous Dispersion Method within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe80

b:15.0
occ:1.00
FE A:HEM80 0.0 15.0 1.0
NA A:HEM80 1.9 14.4 1.0
NC A:HEM80 2.0 18.0 1.0
ND A:HEM80 2.1 12.9 1.0
NB A:HEM80 2.1 10.4 1.0
C1A A:HEM80 3.0 24.5 1.0
C4A A:HEM80 3.0 34.4 1.0
C4D A:HEM80 3.0 16.2 1.0
C1C A:HEM80 3.0 19.3 1.0
C1B A:HEM80 3.0 10.4 1.0
C1D A:HEM80 3.1 12.1 1.0
C4C A:HEM80 3.1 23.1 1.0
C4B A:HEM80 3.1 14.8 1.0
CHA A:HEM80 3.3 13.8 1.0
CHC A:HEM80 3.4 11.5 1.0
CHB A:HEM80 3.4 10.7 1.0
CHD A:HEM80 3.4 24.4 1.0
C2A A:HEM80 4.2 21.7 1.0
C3A A:HEM80 4.2 17.8 1.0
C2C A:HEM80 4.2 23.6 1.0
C3D A:HEM80 4.3 22.2 1.0
C3C A:HEM80 4.3 24.3 1.0
C2D A:HEM80 4.3 14.0 1.0
C3B A:HEM80 4.3 11.3 1.0
C2B A:HEM80 4.4 7.6 1.0

Reference:

A.Nakagawa, Y.Higuchi, N.Yasuoka, Y.Katsube, T.Yagi. S-Class Cytochromes C Have A Variety of Folding Patterns: Structure of Cytochrome C-553 From Desulfovibrio Vulgaris Determined By the Multi-Wavelength Anomalous Dispersion Method. J.Biochem.(Tokyo) V. 108 701 1990.
ISSN: ISSN 0021-924X
PubMed: 1964450
Page generated: Sun Dec 13 14:08:25 2020

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