Iron in PDB 1cg5: Deoxy Form Hemoglobin From Dasyatis Akajei

The structure of Deoxy Form Hemoglobin From Dasyatis Akajei, PDB code: 1cg5 was solved by K.T.Chong, H.Morimoto, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	8.00 / 1.60
Space group	P 31 1 2
Cell size a, b, c (Å), α, β, γ (°)	77.760, 77.760, 99.320, 90.00, 90.00, 120.00
R / Rfree (%)	19.1 / 23.2

The binding sites of Iron atom in the Deoxy Form Hemoglobin From Dasyatis Akajei (pdb code 1cg5). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Deoxy Form Hemoglobin From Dasyatis Akajei, PDB code: 1cg5:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the Deoxy Form Hemoglobin From Dasyatis Akajei


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Deoxy Form Hemoglobin From Dasyatis Akajei within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe142 b:11.6 occ:1.00 FE A:HEM142 0.0 11.6 1.0 NA A:HEM142 2.0 11.5 1.0 NB A:HEM142 2.0 9.7 1.0 ND A:HEM142 2.0 11.3 1.0 NC A:HEM142 2.0 9.6 1.0 NE2 A:HIS88 2.2 10.8 1.0 CE1 A:HIS88 3.0 9.1 1.0 C1A A:HEM142 3.0 12.9 1.0 C4B A:HEM142 3.0 11.5 1.0 C4A A:HEM142 3.1 11.9 1.0 C4D A:HEM142 3.1 10.6 1.0 C1B A:HEM142 3.1 10.7 1.0 C1D A:HEM142 3.1 10.3 1.0 C4C A:HEM142 3.1 10.0 1.0 C1C A:HEM142 3.1 9.1 1.0 CD2 A:HIS88 3.3 9.7 1.0 CHA A:HEM142 3.4 10.3 1.0 CHB A:HEM142 3.4 11.0 1.0 CHD A:HEM142 3.4 8.3 1.0 CHC A:HEM142 3.4 10.3 1.0 O A:HOH177 3.8 25.9 1.0 C2A A:HEM142 4.3 15.4 1.0 ND1 A:HIS88 4.3 9.9 1.0 C3D A:HEM142 4.3 11.8 1.0 C3B A:HEM142 4.3 12.1 1.0 C3A A:HEM142 4.3 14.3 1.0 C2B A:HEM142 4.3 12.5 1.0 C2D A:HEM142 4.3 11.2 1.0 C3C A:HEM142 4.3 8.9 1.0 C2C A:HEM142 4.4 10.1 1.0 CG A:HIS88 4.4 9.3 1.0 NE2 A:HIS59 4.4 17.3 1.0 CE1 A:HIS59 4.4 14.9 1.0 CG2 A:VAL63 4.8 11.8 1.0 CD1 A:LEU92 4.8 10.4 1.0

Iron binding site 2 out of 2 in the Deoxy Form Hemoglobin From Dasyatis Akajei


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Deoxy Form Hemoglobin From Dasyatis Akajei within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe142 b:12.6 occ:1.00 FE B:HEM142 0.0 12.6 1.0 NC B:HEM142 2.0 12.7 1.0 ND B:HEM142 2.0 13.4 1.0 NA B:HEM142 2.0 16.6 1.0 NB B:HEM142 2.0 13.9 1.0 NE2 B:HIS88 2.3 13.2 1.0 C4C B:HEM142 3.0 12.9 1.0 C1D B:HEM142 3.0 13.2 1.0 C4D B:HEM142 3.0 13.7 1.0 C1C B:HEM142 3.0 13.1 1.0 C1A B:HEM142 3.1 15.6 1.0 C4A B:HEM142 3.1 15.3 1.0 C4B B:HEM142 3.1 12.6 1.0 C1B B:HEM142 3.1 11.9 1.0 CE1 B:HIS88 3.1 13.5 1.0 CD2 B:HIS88 3.3 11.3 1.0 CHD B:HEM142 3.4 12.2 1.0 CHA B:HEM142 3.4 13.7 1.0 CHC B:HEM142 3.4 12.1 1.0 CHB B:HEM142 3.5 13.5 1.0 NE2 B:HIS59 3.9 12.6 1.0 CE1 B:HIS59 4.0 16.3 1.0 C3C B:HEM142 4.3 13.9 1.0 C3D B:HEM142 4.3 15.7 1.0 C2D B:HEM142 4.3 14.7 1.0 C2C B:HEM142 4.3 12.9 1.0 C2A B:HEM142 4.3 16.9 1.0 C3A B:HEM142 4.3 16.2 1.0 C2B B:HEM142 4.3 13.1 1.0 C3B B:HEM142 4.3 14.3 1.0 ND1 B:HIS88 4.4 12.5 1.0 CG B:HIS88 4.4 9.4 1.0 CG2 B:VAL63 4.7 12.0 1.0 CE1 B:PHE98 5.0 10.8 1.0

K.T.Chong, G.Miyazaki, H.Morimoto, Y.Oda, S.Y.Park. Structures of the Deoxy and Co Forms of Haemoglobin From Dasyatis Akajei, A Cartilaginous Fish. Acta Crystallogr.,Sect.D V. 55 1291 1999.
ISSN: ISSN 0907-4449
PubMed: 10393295
DOI: 10.1107/S0907444999005934