Atomistry » Iron » PDB 1cp4-1czp » 1cpw
Atomistry »
  Iron »
    PDB 1cp4-1czp »
      1cpw »

Iron in PDB 1cpw: Recombinant Sperm Whale Myoglobin L104W Mutant (Met)

Protein crystallography data

The structure of Recombinant Sperm Whale Myoglobin L104W Mutant (Met), PDB code: 1cpw was solved by E.C.Liong, G.N.Phillips Jr., with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 5.00 / 2.20
Space group P 6
Cell size a, b, c (Å), α, β, γ (°) 91.586, 91.586, 45.907, 90.00, 90.00, 120.00
R / Rfree (%) 17 / 21.3

Iron Binding Sites:

The binding sites of Iron atom in the Recombinant Sperm Whale Myoglobin L104W Mutant (Met) (pdb code 1cpw). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Recombinant Sperm Whale Myoglobin L104W Mutant (Met), PDB code: 1cpw:

Iron binding site 1 out of 1 in 1cpw

Go back to Iron Binding Sites List in 1cpw
Iron binding site 1 out of 1 in the Recombinant Sperm Whale Myoglobin L104W Mutant (Met)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Recombinant Sperm Whale Myoglobin L104W Mutant (Met) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe154

b:17.0
occ:1.00
FE A:HEM154 0.0 17.0 1.0
NC A:HEM154 2.0 15.3 1.0
ND A:HEM154 2.0 15.1 1.0
NA A:HEM154 2.0 10.7 1.0
NB A:HEM154 2.0 18.8 1.0
NE2 A:HIS93 2.1 23.2 1.0
O A:HOH155 2.2 20.1 1.0
C4A A:HEM154 3.0 14.0 1.0
C4C A:HEM154 3.0 11.4 1.0
C1C A:HEM154 3.0 13.8 1.0
C1B A:HEM154 3.0 20.1 1.0
CE1 A:HIS93 3.0 20.0 1.0
C4D A:HEM154 3.0 12.9 1.0
C1A A:HEM154 3.0 18.4 1.0
C1D A:HEM154 3.0 14.9 1.0
C4B A:HEM154 3.0 15.7 1.0
CD2 A:HIS93 3.2 20.9 1.0
CHB A:HEM154 3.4 14.0 1.0
CHD A:HEM154 3.4 11.7 1.0
CHA A:HEM154 3.4 13.3 1.0
CHC A:HEM154 3.4 13.3 1.0
ND1 A:HIS93 4.2 19.8 1.0
C3A A:HEM154 4.2 19.9 1.0
C2A A:HEM154 4.2 21.3 1.0
C2C A:HEM154 4.2 20.2 1.0
C3D A:HEM154 4.2 17.6 1.0
C2B A:HEM154 4.2 18.3 1.0
C2D A:HEM154 4.2 18.5 1.0
C3C A:HEM154 4.2 20.2 1.0
C3B A:HEM154 4.3 14.1 1.0
CG A:HIS93 4.3 18.7 1.0
NE2 A:HIS64 4.4 14.6 1.0
CE1 A:HIS64 4.7 15.1 1.0
CG2 A:VAL68 4.9 19.8 1.0

Reference:

E.C.Liong, Y.Dou, E.E.Scott, J.S.Olson, G.N.Phillips Jr.. Waterproofing the Heme Pocket. Role of Proximal Amino Acid Side Chains in Preventing Hemin Loss From Myoglobin. J.Biol.Chem. V. 276 9093 2001.
ISSN: ISSN 0021-9258
PubMed: 11084036
DOI: 10.1074/JBC.M008593200
Page generated: Sat Aug 3 03:30:46 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy