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Iron in PDB 1cqx: Crystal Structure of the Flavohemoglobin From Alcaligenes Eutrophus at 1.75 A Resolution

Protein crystallography data

The structure of Crystal Structure of the Flavohemoglobin From Alcaligenes Eutrophus at 1.75 A Resolution, PDB code: 1cqx was solved by U.Ermler, R.A.Siddiqui, R.Cramm, B.Friedrich, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 1.75
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 52.200, 85.800, 103.900, 90.00, 81.80, 90.00
R / Rfree (%) 18.2 / 21.5

Other elements in 1cqx:

The structure of Crystal Structure of the Flavohemoglobin From Alcaligenes Eutrophus at 1.75 A Resolution also contains other interesting chemical elements:

Sodium (Na) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of the Flavohemoglobin From Alcaligenes Eutrophus at 1.75 A Resolution (pdb code 1cqx). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure of the Flavohemoglobin From Alcaligenes Eutrophus at 1.75 A Resolution, PDB code: 1cqx:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 1cqx

Go back to Iron Binding Sites List in 1cqx
Iron binding site 1 out of 2 in the Crystal Structure of the Flavohemoglobin From Alcaligenes Eutrophus at 1.75 A Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of the Flavohemoglobin From Alcaligenes Eutrophus at 1.75 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe404

b:14.3
occ:1.00
FE A:HEM404 0.0 14.3 1.0
NA A:HEM404 2.0 13.7 1.0
ND A:HEM404 2.0 15.8 1.0
NB A:HEM404 2.0 13.5 1.0
NC A:HEM404 2.0 13.2 1.0
NE2 A:HIS85 2.4 13.3 1.0
C1A A:HEM404 3.0 15.7 1.0
C4D A:HEM404 3.0 15.6 1.0
C4A A:HEM404 3.0 13.2 1.0
C4B A:HEM404 3.1 11.7 1.0
C1B A:HEM404 3.1 13.0 1.0
C1D A:HEM404 3.1 14.0 1.0
C1C A:HEM404 3.1 12.7 1.0
C4C A:HEM404 3.1 14.1 1.0
CE1 A:HIS85 3.3 12.3 1.0
CD2 A:HIS85 3.3 12.1 1.0
CHA A:HEM404 3.4 13.6 1.0
CHC A:HEM404 3.4 11.9 1.0
CHB A:HEM404 3.5 12.9 1.0
CHD A:HEM404 3.5 13.2 1.0
C29 A:DGG406 3.8 26.8 1.0
C30 A:DGG406 4.0 26.6 1.0
C2A A:HEM404 4.2 15.5 1.0
C3A A:HEM404 4.3 14.3 1.0
C3D A:HEM404 4.3 16.8 1.0
C2B A:HEM404 4.3 11.1 1.0
C2D A:HEM404 4.3 15.5 1.0
C2C A:HEM404 4.4 14.0 1.0
C3B A:HEM404 4.4 12.1 1.0
C3C A:HEM404 4.4 13.2 1.0
ND1 A:HIS85 4.4 14.0 1.0
CG A:HIS85 4.4 12.9 1.0
C39 A:DGG406 4.5 27.4 1.0
CG2 A:ILE81 4.8 17.2 1.0
C27 A:DGG406 4.9 26.1 1.0
C28 A:DGG406 5.0 24.4 1.0

Iron binding site 2 out of 2 in 1cqx

Go back to Iron Binding Sites List in 1cqx
Iron binding site 2 out of 2 in the Crystal Structure of the Flavohemoglobin From Alcaligenes Eutrophus at 1.75 A Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of the Flavohemoglobin From Alcaligenes Eutrophus at 1.75 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe404

b:10.8
occ:1.00
FE B:HEM404 0.0 10.8 1.0
NB B:HEM404 1.9 12.9 1.0
NC B:HEM404 1.9 10.4 1.0
ND B:HEM404 2.0 13.9 1.0
NA B:HEM404 2.0 13.1 1.0
NE2 B:HIS85 2.4 13.5 1.0
C4B B:HEM404 3.0 11.6 1.0
C1C B:HEM404 3.0 10.2 1.0
C4C B:HEM404 3.1 10.6 1.0
C1B B:HEM404 3.1 12.1 1.0
C4D B:HEM404 3.1 12.5 1.0
C4A B:HEM404 3.1 12.2 1.0
C1A B:HEM404 3.1 13.3 1.0
C1D B:HEM404 3.1 11.1 1.0
CE1 B:HIS85 3.3 10.8 1.0
CD2 B:HIS85 3.4 10.6 1.0
CHC B:HEM404 3.4 12.1 1.0
CHD B:HEM404 3.4 9.8 1.0
CHA B:HEM404 3.5 11.6 1.0
CHB B:HEM404 3.5 12.6 1.0
C29 B:DGG406 3.7 28.7 1.0
C3B B:HEM404 4.2 12.9 1.0
C30 B:DGG406 4.2 28.9 1.0
C2C B:HEM404 4.2 10.7 1.0
C2B B:HEM404 4.3 12.7 1.0
C3C B:HEM404 4.3 11.2 1.0
C3A B:HEM404 4.3 12.0 1.0
C2A B:HEM404 4.3 13.0 1.0
C3D B:HEM404 4.3 13.8 1.0
C2D B:HEM404 4.4 11.1 1.0
C27 B:DGG406 4.4 27.5 1.0
ND1 B:HIS85 4.4 13.3 1.0
CG B:HIS85 4.5 11.0 1.0
C28 B:DGG406 4.7 27.3 1.0
CG2 B:ILE81 4.8 12.8 1.0
C39 B:DGG406 4.9 30.6 1.0

Reference:

U.Ermler, R.A.Siddiqui, R.Cramm, B.Friedrich. Crystal Structure of the Flavohemoglobin From Alcaligenes Eutrophus at 1.75 A Resolution. Embo J. V. 14 6067 1995.
ISSN: ISSN 0261-4189
PubMed: 8557026
Page generated: Sat Aug 3 03:31:04 2024

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