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Iron in PDB 1cry: Application of An Automatic Molecular Replacement Procedure to Crystal Structure of Cytochrome C2 From Rhodopseudomonas Viridis

Protein crystallography data

The structure of Application of An Automatic Molecular Replacement Procedure to Crystal Structure of Cytochrome C2 From Rhodopseudomonas Viridis, PDB code: 1cry was solved by K.Miki, S.Sogabe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) N/A / 3.00
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 76.130, 76.130, 40.400, 90.00, 90.00, 120.00
R / Rfree (%) n/a / n/a

Iron Binding Sites:

The binding sites of Iron atom in the Application of An Automatic Molecular Replacement Procedure to Crystal Structure of Cytochrome C2 From Rhodopseudomonas Viridis (pdb code 1cry). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Application of An Automatic Molecular Replacement Procedure to Crystal Structure of Cytochrome C2 From Rhodopseudomonas Viridis, PDB code: 1cry:

Iron binding site 1 out of 1 in 1cry

Go back to Iron Binding Sites List in 1cry
Iron binding site 1 out of 1 in the Application of An Automatic Molecular Replacement Procedure to Crystal Structure of Cytochrome C2 From Rhodopseudomonas Viridis


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Application of An Automatic Molecular Replacement Procedure to Crystal Structure of Cytochrome C2 From Rhodopseudomonas Viridis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe108

b:16.2
occ:1.00
FE A:HEM108 0.0 16.2 1.0
NE2 A:HIS17 1.9 11.5 1.0
NC A:HEM108 2.0 16.5 1.0
NA A:HEM108 2.0 16.6 1.0
NB A:HEM108 2.0 16.6 1.0
ND A:HEM108 2.0 17.0 1.0
SD A:MET79 2.3 15.2 1.0
CE1 A:HIS17 2.8 11.8 1.0
CD2 A:HIS17 2.9 11.7 1.0
C1B A:HEM108 3.0 16.8 1.0
C4C A:HEM108 3.0 16.7 1.0
C1C A:HEM108 3.0 16.7 1.0
C1A A:HEM108 3.0 17.0 1.0
C4D A:HEM108 3.0 17.0 1.0
C4B A:HEM108 3.1 16.5 1.0
C4A A:HEM108 3.1 16.2 1.0
C1D A:HEM108 3.1 16.7 1.0
CE A:MET79 3.4 14.4 1.0
CHA A:HEM108 3.4 17.7 1.0
CHD A:HEM108 3.4 16.7 1.0
CHB A:HEM108 3.4 16.6 1.0
CHC A:HEM108 3.4 16.5 1.0
CG A:MET79 3.8 14.7 1.0
ND1 A:HIS17 3.9 12.2 1.0
CG A:HIS17 4.0 11.6 1.0
C2B A:HEM108 4.2 16.9 1.0
C3C A:HEM108 4.2 17.0 1.0
C3B A:HEM108 4.2 16.9 1.0
C2C A:HEM108 4.2 17.0 1.0
C2A A:HEM108 4.3 16.7 1.0
C3D A:HEM108 4.3 16.6 1.0
C2D A:HEM108 4.3 16.6 1.0
C3A A:HEM108 4.3 16.4 1.0
CB A:MET79 4.4 15.2 1.0
OH A:TYR66 4.9 17.0 1.0

Reference:

K.Miki, S.Sogabe, A.Uno, T.Ezoe, N.Kasai, M.Saeda, Y.Matsuura, M.Miki. Application of An Automatic Molecular-Replacement Procedure to Crystal Structure Analysis of Cytochrome C2 From Rhodopseudomonas Viridis. Acta Crystallogr.,Sect.D V. 50 271 1994.
ISSN: ISSN 0907-4449
PubMed: 15299438
DOI: 10.1107/S0907444993013952
Page generated: Sat Aug 3 03:31:08 2024

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