Atomistry » Iron » PDB 1d06-1dj5 » 1dj1
Atomistry »
  Iron »
    PDB 1d06-1dj5 »
      1dj1 »

Iron in PDB 1dj1: Crystal Structure of R48A Mutant of Cytochrome C Peroxidase

Enzymatic activity of Crystal Structure of R48A Mutant of Cytochrome C Peroxidase

All present enzymatic activity of Crystal Structure of R48A Mutant of Cytochrome C Peroxidase:
1.11.1.5;

Protein crystallography data

The structure of Crystal Structure of R48A Mutant of Cytochrome C Peroxidase, PDB code: 1dj1 was solved by J.Hirst, D.B.Goodin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 1.93
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 105.480, 74.320, 44.310, 90.00, 90.00, 90.00
R / Rfree (%) n/a / n/a

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of R48A Mutant of Cytochrome C Peroxidase (pdb code 1dj1). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of R48A Mutant of Cytochrome C Peroxidase, PDB code: 1dj1:

Iron binding site 1 out of 1 in 1dj1

Go back to Iron Binding Sites List in 1dj1
Iron binding site 1 out of 1 in the Crystal Structure of R48A Mutant of Cytochrome C Peroxidase


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of R48A Mutant of Cytochrome C Peroxidase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe1

b:10.8
occ:1.00
FE A:HEM1 0.0 10.8 1.0
NC A:HEM1 2.0 12.6 1.0
NE2 A:HIS175 2.1 6.7 1.0
NA A:HEM1 2.1 8.7 1.0
ND A:HEM1 2.1 11.9 1.0
NB A:HEM1 2.1 13.2 1.0
O A:HOH313 2.1 8.5 1.0
CE1 A:HIS175 3.0 8.2 1.0
C1A A:HEM1 3.0 4.9 1.0
C4B A:HEM1 3.0 10.7 1.0
C1C A:HEM1 3.0 9.3 1.0
C4C A:HEM1 3.0 17.7 1.0
C4D A:HEM1 3.1 1.3 1.0
C1D A:HEM1 3.1 9.4 1.0
C4A A:HEM1 3.1 8.6 1.0
C1B A:HEM1 3.1 9.4 1.0
CD2 A:HIS175 3.1 6.8 1.0
CHC A:HEM1 3.3 0.0 1.0
CHA A:HEM1 3.4 0.4 1.0
CHD A:HEM1 3.4 5.7 1.0
CHB A:HEM1 3.4 6.4 1.0
NE1 A:TRP51 4.0 7.9 1.0
ND1 A:HIS175 4.1 8.8 1.0
O A:HOH300 4.2 14.1 1.0
CG A:HIS175 4.2 8.1 1.0
C2A A:HEM1 4.2 12.8 1.0
C3C A:HEM1 4.2 13.4 1.0
C3D A:HEM1 4.3 0.0 1.0
C2C A:HEM1 4.3 7.6 1.0
C3B A:HEM1 4.3 9.8 1.0
C3A A:HEM1 4.3 6.7 1.0
C2D A:HEM1 4.3 3.6 1.0
C2B A:HEM1 4.3 7.5 1.0
O A:HOH344 4.3 10.7 1.0
CD1 A:TRP51 4.5 6.1 1.0
O A:HOH423 4.6 12.9 1.0

Reference:

J.Hirst, D.B.Goodin. Unusual Oxidative Chemistry of N(Omega)-Hydroxyarginine and N-Hydroxyguanidine Catalyzed at An Engineered Cavity in A Heme Peroxidase. J.Biol.Chem. V. 275 8582 2000.
ISSN: ISSN 0021-9258
PubMed: 10722697
DOI: 10.1074/JBC.275.12.8582
Page generated: Sun Dec 13 14:10:27 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy