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Iron in PDB 1dlw: X-Ray Crystal Structure of Truncated Hemoglobin From P.Caudatum.

Protein crystallography data

The structure of X-Ray Crystal Structure of Truncated Hemoglobin From P.Caudatum., PDB code: 1dlw was solved by A.Pesce, M.Couture, M.Guertin, S.Dewilde, L.Moens, M.Bolognesi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.54
Space group P 43
Cell size a, b, c (Å), α, β, γ (°) 61.180, 61.180, 35.790, 90.00, 90.00, 90.00
R / Rfree (%) 13.3 / 18.3

Iron Binding Sites:

The binding sites of Iron atom in the X-Ray Crystal Structure of Truncated Hemoglobin From P.Caudatum. (pdb code 1dlw). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the X-Ray Crystal Structure of Truncated Hemoglobin From P.Caudatum., PDB code: 1dlw:

Iron binding site 1 out of 1 in 1dlw

Go back to Iron Binding Sites List in 1dlw
Iron binding site 1 out of 1 in the X-Ray Crystal Structure of Truncated Hemoglobin From P.Caudatum.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of X-Ray Crystal Structure of Truncated Hemoglobin From P.Caudatum. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe144

b:11.2
occ:1.00
FE A:HEM144 0.0 11.2 1.0
NA A:HEM144 2.0 12.0 1.0
NB A:HEM144 2.0 11.2 1.0
ND A:HEM144 2.0 11.6 1.0
NC A:HEM144 2.0 11.3 1.0
O A:HOH351 2.1 21.7 1.0
NE2 A:HIS68 2.1 8.4 1.0
C4A A:HEM144 3.0 12.8 1.0
C1A A:HEM144 3.0 13.9 1.0
C1B A:HEM144 3.0 12.2 1.0
C4D A:HEM144 3.1 13.0 1.0
C4B A:HEM144 3.1 12.2 1.0
C1D A:HEM144 3.1 12.4 1.0
C4C A:HEM144 3.1 12.1 1.0
C1C A:HEM144 3.1 11.4 1.0
CE1 A:HIS68 3.1 9.8 1.0
CD2 A:HIS68 3.1 9.5 1.0
CHB A:HEM144 3.3 12.1 1.0
CHA A:HEM144 3.4 12.1 1.0
CHD A:HEM144 3.4 13.6 1.0
CHC A:HEM144 3.5 11.2 1.0
ND1 A:HIS68 4.2 8.9 1.0
OE1 A:GLN41 4.2 17.1 1.0
C3A A:HEM144 4.3 13.4 1.0
C2A A:HEM144 4.3 14.1 1.0
C2B A:HEM144 4.3 12.4 1.0
C3D A:HEM144 4.3 15.4 1.0
C3B A:HEM144 4.3 13.2 1.0
CG A:HIS68 4.3 9.4 1.0
C2D A:HEM144 4.3 13.9 1.0
C3C A:HEM144 4.3 12.1 1.0
C2C A:HEM144 4.3 12.2 1.0
OH A:TYR20 4.6 10.7 1.0

Reference:

A.Pesce, M.Couture, S.Dewilde, M.Guertin, K.Yamauchi, P.Ascenzi, L.Moens, M.Bolognesi. A Novel Two-Over-Two Alpha-Helical Sandwich Fold Is Characteristic of the Truncated Hemoglobin Family. Embo J. V. 19 2424 2000.
ISSN: ISSN 0261-4189
PubMed: 10835341
DOI: 10.1093/EMBOJ/19.11.2424
Page generated: Sun Dec 13 14:10:39 2020

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