Atomistry » Iron » PDB 1dj7-1dry » 1do3
Atomistry »
  Iron »
    PDB 1dj7-1dry »
      1do3 »

Iron in PDB 1do3: Carbonmonoxy-Myoglobin (Mutant L29W) After Photolysis at T>180K

Protein crystallography data

The structure of Carbonmonoxy-Myoglobin (Mutant L29W) After Photolysis at T>180K, PDB code: 1do3 was solved by A.Ostermann, R.Waschipky, F.G.Parak, G.U.Nienhaus, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 7.00 / 1.55
Space group P 6
Cell size a, b, c (Å), α, β, γ (°) 90.460, 90.460, 45.260, 90.00, 90.00, 120.00
R / Rfree (%) 19.3 / 21.8

Iron Binding Sites:

The binding sites of Iron atom in the Carbonmonoxy-Myoglobin (Mutant L29W) After Photolysis at T>180K (pdb code 1do3). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Carbonmonoxy-Myoglobin (Mutant L29W) After Photolysis at T>180K, PDB code: 1do3:

Iron binding site 1 out of 1 in 1do3

Go back to Iron Binding Sites List in 1do3
Iron binding site 1 out of 1 in the Carbonmonoxy-Myoglobin (Mutant L29W) After Photolysis at T>180K


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Carbonmonoxy-Myoglobin (Mutant L29W) After Photolysis at T>180K within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe154

b:7.4
occ:1.00
FE A:HEM154 0.0 7.4 1.0
ND A:HEM154 2.0 6.5 1.0
NC A:HEM154 2.0 6.4 1.0
NA A:HEM154 2.0 7.4 1.0
NB A:HEM154 2.0 7.0 1.0
NE2 A:HIS93 2.2 5.0 1.0
C1D A:HEM154 3.0 6.6 1.0
C4D A:HEM154 3.0 6.2 1.0
C4C A:HEM154 3.0 5.8 1.0
C1A A:HEM154 3.1 6.0 1.0
C4A A:HEM154 3.1 6.7 1.0
C1C A:HEM154 3.1 5.5 1.0
C1B A:HEM154 3.1 6.5 1.0
C4B A:HEM154 3.1 6.3 1.0
CE1 A:HIS93 3.1 6.6 1.0
CD2 A:HIS93 3.2 5.5 1.0
CHD A:HEM154 3.4 6.3 1.0
CHA A:HEM154 3.4 6.4 1.0
CHB A:HEM154 3.4 7.0 1.0
CHC A:HEM154 3.5 6.2 1.0
C3D A:HEM154 4.2 7.7 1.0
C2D A:HEM154 4.2 7.1 1.0
ND1 A:HIS93 4.3 5.7 1.0
C3C A:HEM154 4.3 6.2 1.0
C2C A:HEM154 4.3 5.0 1.0
C2A A:HEM154 4.3 6.1 1.0
C3A A:HEM154 4.3 5.5 1.0
CG A:HIS93 4.3 4.6 1.0
C2B A:HEM154 4.4 6.7 1.0
C3B A:HEM154 4.4 7.7 1.0
CE1 A:HIS64 4.5 11.2 1.0
CG2 A:VAL68 4.5 3.6 1.0
CH2 A:TRP29 4.9 15.4 1.0
CD2 A:HIS97 5.0 8.7 1.0
NE2 A:HIS64 5.0 11.9 1.0
O A:CMO155 5.0 16.0 0.6

Reference:

A.Ostermann, R.Waschipky, F.G.Parak, G.U.Nienhaus. Ligand Binding and Conformational Motions in Myoglobin. Nature V. 404 205 2000.
ISSN: ISSN 0028-0836
PubMed: 10724176
DOI: 10.1038/35004622
Page generated: Sun Dec 13 14:10:48 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy