Iron in PDB 1dox: 1H and 15N Sequential Assignment, Secondary Structure and Tertiary Fold of [2FE-2S] Ferredoxin From Synechocystis Sp. Pcc 6803
Iron Binding Sites:
The binding sites of Iron atom in the 1H and 15N Sequential Assignment, Secondary Structure and Tertiary Fold of [2FE-2S] Ferredoxin From Synechocystis Sp. Pcc 6803
(pdb code 1dox). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the
1H and 15N Sequential Assignment, Secondary Structure and Tertiary Fold of [2FE-2S] Ferredoxin From Synechocystis Sp. Pcc 6803, PDB code: 1dox:
Jump to Iron binding site number:
1;
2;
Iron binding site 1 out
of 2 in 1dox
Go back to
Iron Binding Sites List in 1dox
Iron binding site 1 out
of 2 in the 1H and 15N Sequential Assignment, Secondary Structure and Tertiary Fold of [2FE-2S] Ferredoxin From Synechocystis Sp. Pcc 6803
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of 1H and 15N Sequential Assignment, Secondary Structure and Tertiary Fold of [2FE-2S] Ferredoxin From Synechocystis Sp. Pcc 6803 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe97
b:0.0
occ:1.00
|
FE1
|
A:FES97
|
0.0
|
0.0
|
1.0
|
SG
|
A:CYS44
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS39
|
2.3
|
0.0
|
1.0
|
H
|
A:CYS44
|
2.4
|
0.0
|
1.0
|
FE2
|
A:FES97
|
2.8
|
0.0
|
1.0
|
H
|
A:ALA43
|
2.8
|
0.0
|
1.0
|
H
|
A:ARG40
|
3.0
|
0.0
|
1.0
|
N
|
A:CYS44
|
3.3
|
0.0
|
1.0
|
H
|
A:CYS39
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS44
|
3.6
|
0.0
|
1.0
|
CB
|
A:CYS39
|
3.6
|
0.0
|
1.0
|
HB3
|
A:CYS39
|
3.6
|
0.0
|
1.0
|
CA
|
A:CYS44
|
3.8
|
0.0
|
1.0
|
N
|
A:ALA43
|
3.8
|
0.0
|
1.0
|
N
|
A:ARG40
|
3.8
|
0.0
|
1.0
|
HA2
|
A:GLY42
|
3.8
|
0.0
|
1.0
|
O
|
A:CYS44
|
3.8
|
0.0
|
1.0
|
C
|
A:CYS44
|
3.9
|
0.0
|
1.0
|
HB3
|
A:CYS44
|
4.0
|
0.0
|
1.0
|
H
|
A:THR46
|
4.0
|
0.0
|
1.0
|
N
|
A:CYS39
|
4.1
|
0.0
|
1.0
|
CA
|
A:CYS39
|
4.3
|
0.0
|
1.0
|
HB3
|
A:PRO36
|
4.3
|
0.0
|
1.0
|
HB2
|
A:SER38
|
4.3
|
0.0
|
1.0
|
SG
|
A:CYS77
|
4.3
|
0.0
|
1.0
|
H
|
A:ALA41
|
4.4
|
0.0
|
1.0
|
C
|
A:ALA43
|
4.4
|
0.0
|
1.0
|
HB2
|
A:PRO36
|
4.4
|
0.0
|
1.0
|
N
|
A:GLY42
|
4.4
|
0.0
|
1.0
|
CA
|
A:GLY42
|
4.4
|
0.0
|
1.0
|
OG1
|
A:THR46
|
4.5
|
0.0
|
1.0
|
HB2
|
A:CYS39
|
4.5
|
0.0
|
1.0
|
C
|
A:CYS39
|
4.5
|
0.0
|
1.0
|
HB2
|
A:CYS44
|
4.5
|
0.0
|
1.0
|
SG
|
A:CYS47
|
4.5
|
0.0
|
1.0
|
H
|
A:GLY42
|
4.5
|
0.0
|
1.0
|
HG1
|
A:THR46
|
4.6
|
0.0
|
1.0
|
C
|
A:GLY42
|
4.6
|
0.0
|
1.0
|
HA
|
A:ARG40
|
4.6
|
0.0
|
1.0
|
N
|
A:SER45
|
4.6
|
0.0
|
1.0
|
N
|
A:ALA41
|
4.6
|
0.0
|
1.0
|
CA
|
A:ALA43
|
4.6
|
0.0
|
1.0
|
CA
|
A:ARG40
|
4.7
|
0.0
|
1.0
|
HB1
|
A:ALA43
|
4.8
|
0.0
|
1.0
|
C
|
A:ALA41
|
4.8
|
0.0
|
1.0
|
HA
|
A:CYS44
|
4.8
|
0.0
|
1.0
|
C
|
A:ARG40
|
4.8
|
0.0
|
1.0
|
CB
|
A:PRO36
|
4.9
|
0.0
|
1.0
|
H
|
A:CYS47
|
5.0
|
0.0
|
1.0
|
N
|
A:THR46
|
5.0
|
0.0
|
1.0
|
|
Iron binding site 2 out
of 2 in 1dox
Go back to
Iron Binding Sites List in 1dox
Iron binding site 2 out
of 2 in the 1H and 15N Sequential Assignment, Secondary Structure and Tertiary Fold of [2FE-2S] Ferredoxin From Synechocystis Sp. Pcc 6803
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of 1H and 15N Sequential Assignment, Secondary Structure and Tertiary Fold of [2FE-2S] Ferredoxin From Synechocystis Sp. Pcc 6803 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe97
b:0.0
occ:1.00
|
FE2
|
A:FES97
|
0.0
|
0.0
|
1.0
|
SG
|
A:CYS77
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS47
|
2.3
|
0.0
|
1.0
|
FE1
|
A:FES97
|
2.8
|
0.0
|
1.0
|
H
|
A:CYS77
|
3.4
|
0.0
|
1.0
|
HB3
|
A:CYS77
|
3.5
|
0.0
|
1.0
|
HB3
|
A:CYS47
|
3.5
|
0.0
|
1.0
|
CB
|
A:CYS77
|
3.6
|
0.0
|
1.0
|
HA2
|
A:GLY42
|
3.6
|
0.0
|
1.0
|
CB
|
A:CYS47
|
3.6
|
0.0
|
1.0
|
H
|
A:CYS47
|
4.1
|
0.0
|
1.0
|
HB2
|
A:CYS47
|
4.2
|
0.0
|
1.0
|
N
|
A:CYS77
|
4.2
|
0.0
|
1.0
|
H
|
A:ALA43
|
4.2
|
0.0
|
1.0
|
HB2
|
A:CYS77
|
4.3
|
0.0
|
1.0
|
HA
|
A:LEU75
|
4.3
|
0.0
|
1.0
|
O
|
A:CYS44
|
4.3
|
0.0
|
1.0
|
SG
|
A:CYS39
|
4.4
|
0.0
|
1.0
|
HD11
|
A:LEU75
|
4.4
|
0.0
|
1.0
|
H
|
A:CYS44
|
4.4
|
0.0
|
1.0
|
O
|
A:ALA41
|
4.4
|
0.0
|
1.0
|
SG
|
A:CYS44
|
4.5
|
0.0
|
1.0
|
H
|
A:THR76
|
4.5
|
0.0
|
1.0
|
CA
|
A:CYS77
|
4.5
|
0.0
|
1.0
|
CA
|
A:GLY42
|
4.6
|
0.0
|
1.0
|
N
|
A:CYS47
|
4.6
|
0.0
|
1.0
|
O
|
A:VAL74
|
4.7
|
0.0
|
1.0
|
H
|
A:THR46
|
4.7
|
0.0
|
1.0
|
HB3
|
A:PRO36
|
4.7
|
0.0
|
1.0
|
CA
|
A:CYS47
|
4.8
|
0.0
|
1.0
|
OG1
|
A:THR76
|
4.8
|
0.0
|
1.0
|
HA
|
A:SER45
|
4.8
|
0.0
|
1.0
|
C
|
A:ALA41
|
4.8
|
0.0
|
1.0
|
HB2
|
A:PRO36
|
4.9
|
0.0
|
1.0
|
H
|
A:ARG40
|
4.9
|
0.0
|
1.0
|
N
|
A:GLY42
|
4.9
|
0.0
|
1.0
|
HG22
|
A:THR76
|
4.9
|
0.0
|
1.0
|
N
|
A:THR76
|
4.9
|
0.0
|
1.0
|
C
|
A:CYS44
|
5.0
|
0.0
|
1.0
|
|
Reference:
C.Lelong,
P.Setif,
H.Bottin,
F.Andre,
J.M.Neumann.
1H and 15N uc(Nmr) Sequential Assignment, Secondary Structure, and Tertiary Fold of [2FE-2S] Ferredoxin From Synechocystis Sp. Pcc 6803. Biochemistry V. 34 14462 1995.
ISSN: ISSN 0006-2960
PubMed: 7578051
DOI: 10.1021/BI00044A024
Page generated: Sat Aug 3 03:54:52 2024
|