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Iron in PDB 1e2w: N168F Mutant of Cytochrome F From Chlamydomonas Reinhardtii

Protein crystallography data

The structure of N168F Mutant of Cytochrome F From Chlamydomonas Reinhardtii, PDB code: 1e2w was solved by G.Sainz, C.J.Carrell, M.V.Ponamarev, G.M.Soriano, W.A.Cramer, J.L.Smith, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.41 / 1.6
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 59.030, 81.180, 61.080, 90.00, 103.52, 90.00
R / Rfree (%) 19.7 / 22.6

Iron Binding Sites:

The binding sites of Iron atom in the N168F Mutant of Cytochrome F From Chlamydomonas Reinhardtii (pdb code 1e2w). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the N168F Mutant of Cytochrome F From Chlamydomonas Reinhardtii, PDB code: 1e2w:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 1e2w

Go back to Iron Binding Sites List in 1e2w
Iron binding site 1 out of 2 in the N168F Mutant of Cytochrome F From Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of N168F Mutant of Cytochrome F From Chlamydomonas Reinhardtii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe900

b:18.4
occ:1.00
FE A:HEC900 0.0 18.4 1.0
NA A:HEC900 2.0 15.3 1.0
ND A:HEC900 2.0 16.9 1.0
NC A:HEC900 2.0 13.6 1.0
NB A:HEC900 2.0 18.8 1.0
NE2 A:HIS25 2.1 10.5 1.0
N A:TYR1 2.1 12.8 1.0
C4D A:HEC900 3.0 15.8 1.0
C1D A:HEC900 3.0 14.9 1.0
C1A A:HEC900 3.0 16.1 1.0
C4C A:HEC900 3.0 17.6 1.0
C1C A:HEC900 3.0 13.8 1.0
C1B A:HEC900 3.0 14.4 1.0
CE1 A:HIS25 3.0 11.6 1.0
C4A A:HEC900 3.0 16.6 1.0
C4B A:HEC900 3.0 15.9 1.0
CA A:TYR1 3.1 12.8 1.0
CD2 A:HIS25 3.2 9.5 1.0
CHA A:HEC900 3.4 14.8 1.0
CHD A:HEC900 3.4 19.0 1.0
CHC A:HEC900 3.4 17.9 1.0
CHB A:HEC900 3.4 13.6 1.0
C A:TYR1 3.8 11.2 1.0
O A:TYR1 4.0 12.3 1.0
ND1 A:HIS25 4.2 10.8 1.0
C3D A:HEC900 4.2 15.9 1.0
C2D A:HEC900 4.2 16.8 1.0
C2B A:HEC900 4.3 13.3 1.0
C2C A:HEC900 4.3 17.0 1.0
C2A A:HEC900 4.3 9.4 1.0
C3A A:HEC900 4.3 12.1 1.0
CG A:HIS25 4.3 12.4 1.0
C3B A:HEC900 4.3 15.6 1.0
C3C A:HEC900 4.3 17.9 1.0
CB A:TYR1 4.4 14.7 1.0
CD2 A:PHE4 4.6 17.5 1.0
CG A:TYR1 4.8 16.1 1.0
N A:PRO2 4.8 12.4 1.0
ND2 A:ASN153 4.9 12.4 1.0

Iron binding site 2 out of 2 in 1e2w

Go back to Iron Binding Sites List in 1e2w
Iron binding site 2 out of 2 in the N168F Mutant of Cytochrome F From Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of N168F Mutant of Cytochrome F From Chlamydomonas Reinhardtii within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe900

b:18.4
occ:1.00
FE B:HEC900 0.0 18.4 1.0
ND B:HEC900 2.0 16.9 1.0
NA B:HEC900 2.0 15.3 1.0
NC B:HEC900 2.0 13.6 1.0
NB B:HEC900 2.0 18.8 1.0
NE2 B:HIS25 2.1 9.6 1.0
N B:TYR1 2.1 10.0 1.0
CE1 B:HIS25 3.0 9.1 1.0
C1D B:HEC900 3.0 14.9 1.0
C4A B:HEC900 3.0 16.6 1.0
C1B B:HEC900 3.0 14.4 1.0
C1A B:HEC900 3.0 16.1 1.0
C4D B:HEC900 3.0 15.8 1.0
C1C B:HEC900 3.0 13.8 1.0
C4C B:HEC900 3.0 17.6 1.0
C4B B:HEC900 3.0 15.9 1.0
CD2 B:HIS25 3.1 10.4 1.0
CA B:TYR1 3.2 10.6 1.0
CHB B:HEC900 3.4 13.6 1.0
CHD B:HEC900 3.4 19.0 1.0
CHA B:HEC900 3.4 14.8 1.0
CHC B:HEC900 3.4 17.9 1.0
C B:TYR1 3.8 9.9 1.0
O B:TYR1 4.0 11.6 1.0
ND1 B:HIS25 4.1 9.4 1.0
CG B:HIS25 4.2 10.1 1.0
C3D B:HEC900 4.2 15.9 1.0
C2D B:HEC900 4.2 16.8 1.0
C2A B:HEC900 4.2 9.4 1.0
C3A B:HEC900 4.2 12.1 1.0
C2B B:HEC900 4.3 13.3 1.0
C2C B:HEC900 4.3 17.0 1.0
C3B B:HEC900 4.3 15.6 1.0
C3C B:HEC900 4.3 17.9 1.0
CB B:TYR1 4.4 13.5 1.0
CG B:TYR1 4.7 14.8 1.0
CD2 B:PHE4 4.8 13.8 1.0
N B:PRO2 4.8 13.5 1.0
ND2 B:ASN153 5.0 10.7 1.0

Reference:

G.Sainz, C.J.Carrell, M.V.Ponamarev, G.M.Soriano, W.A.Cramer, J.L.Smith. Interruption of the Internal Water Chain of Cytochrome F Impairs Photosynthetic Function Biochemistry V. 39 9164 2000.
ISSN: ISSN 0006-2960
PubMed: 10924110
DOI: 10.1021/BI0004596
Page generated: Sat Aug 3 04:11:24 2024

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