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Iron in PDB 1e5h: Delta-R307A Deacetoxycephalosporin C Synthase Complexed with Succinate and Carbon Dioxide

Protein crystallography data

The structure of Delta-R307A Deacetoxycephalosporin C Synthase Complexed with Succinate and Carbon Dioxide, PDB code: 1e5h was solved by H.J.Lee, M.D.Lloyd, K.Harlos, I.J.Clifton, J.E.Baldwin, C.J.Schofield, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 16.57 / 1.96
Space group H 3
Cell size a, b, c (Å), α, β, γ (°) 106.260, 106.260, 71.060, 90.00, 90.00, 120.00
R / Rfree (%) 22 / 25.2

Iron Binding Sites:

The binding sites of Iron atom in the Delta-R307A Deacetoxycephalosporin C Synthase Complexed with Succinate and Carbon Dioxide (pdb code 1e5h). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Delta-R307A Deacetoxycephalosporin C Synthase Complexed with Succinate and Carbon Dioxide, PDB code: 1e5h:

Iron binding site 1 out of 1 in 1e5h

Go back to Iron Binding Sites List in 1e5h
Iron binding site 1 out of 1 in the Delta-R307A Deacetoxycephalosporin C Synthase Complexed with Succinate and Carbon Dioxide


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Delta-R307A Deacetoxycephalosporin C Synthase Complexed with Succinate and Carbon Dioxide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe901

b:28.7
occ:1.00
O A:HOH2072 2.1 28.2 1.0
OD1 A:ASP185 2.1 25.4 1.0
O2 A:CO2903 2.2 33.0 1.0
O1 A:SIN902 2.3 36.9 1.0
NE2 A:HIS243 2.3 29.7 1.0
NE2 A:HIS183 2.3 30.4 1.0
OD2 A:ASP185 2.7 26.8 1.0
CG A:ASP185 2.8 25.1 1.0
C1 A:SIN902 3.1 39.9 1.0
O2 A:SIN902 3.2 40.3 1.0
CE1 A:HIS183 3.2 30.9 1.0
CD2 A:HIS243 3.3 29.8 1.0
CE1 A:HIS243 3.3 29.7 1.0
CD2 A:HIS183 3.4 30.5 1.0
C A:CO2903 3.4 34.3 1.0
CG2 A:ILE305 4.1 27.2 1.0
CB A:ASP185 4.3 24.4 1.0
ND1 A:HIS183 4.4 31.2 1.0
ND1 A:HIS243 4.4 29.6 1.0
CG A:HIS243 4.4 30.3 1.0
CG A:HIS183 4.5 31.2 1.0
C2 A:SIN902 4.5 40.7 1.0
O1 A:CO2903 4.6 34.9 1.0
CE1 A:PHE264 4.8 20.1 1.0
CA A:ASP185 4.8 23.7 1.0
CD2 A:PHE225 4.9 24.4 1.0
N A:ASP185 4.9 24.4 1.0
C3 A:SIN902 4.9 41.8 1.0

Reference:

H.J.Lee, M.D.Lloyd, K.Harlos, I.J.Clifton, J.E.Baldwin, C.J.Schofield. Kinetic and Crystallographic Studies on Deacetoxycephalosporin C Synthase (Daocs) J.Mol.Biol. V. 308 937 2001.
ISSN: ISSN 0022-2836
PubMed: 11352583
DOI: 10.1006/JMBI.2001.4649
Page generated: Sun Dec 13 14:12:01 2020

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