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Iron in PDB 1eqg: The 2.6 Angstrom Model of Ovine Cox-1 Complexed with Ibuprofen

Enzymatic activity of The 2.6 Angstrom Model of Ovine Cox-1 Complexed with Ibuprofen

All present enzymatic activity of The 2.6 Angstrom Model of Ovine Cox-1 Complexed with Ibuprofen:
1.14.99.1;

Protein crystallography data

The structure of The 2.6 Angstrom Model of Ovine Cox-1 Complexed with Ibuprofen, PDB code: 1eqg was solved by P.J.Loll, B.S.Selinsky, K.Gupta, C.T.Sharkey, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.87 / 2.61
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 98.650, 204.990, 221.960, 90.00, 90.00, 90.00
R / Rfree (%) 22.3 / 25

Iron Binding Sites:

The binding sites of Iron atom in the The 2.6 Angstrom Model of Ovine Cox-1 Complexed with Ibuprofen (pdb code 1eqg). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the The 2.6 Angstrom Model of Ovine Cox-1 Complexed with Ibuprofen, PDB code: 1eqg:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 1eqg

Go back to Iron Binding Sites List in 1eqg
Iron binding site 1 out of 2 in the The 2.6 Angstrom Model of Ovine Cox-1 Complexed with Ibuprofen


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of The 2.6 Angstrom Model of Ovine Cox-1 Complexed with Ibuprofen within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe601

b:23.7
occ:1.00
FE A:HEM601 0.0 23.7 1.0
NA A:HEM601 2.0 26.2 1.0
ND A:HEM601 2.0 24.9 1.0
NB A:HEM601 2.0 23.8 1.0
NC A:HEM601 2.0 22.9 1.0
NE2 A:HIS388 2.4 23.0 1.0
C4D A:HEM601 3.0 24.4 1.0
C4A A:HEM601 3.0 27.0 1.0
C1A A:HEM601 3.0 27.6 1.0
C1D A:HEM601 3.0 24.2 1.0
C1B A:HEM601 3.0 23.8 1.0
C1C A:HEM601 3.0 23.4 1.0
C4C A:HEM601 3.0 23.1 1.0
C4B A:HEM601 3.0 22.2 1.0
CD2 A:HIS388 3.2 22.2 1.0
CHA A:HEM601 3.4 26.4 1.0
CHB A:HEM601 3.4 26.2 1.0
CHC A:HEM601 3.4 22.4 1.0
CHD A:HEM601 3.4 23.2 1.0
CE1 A:HIS388 3.5 22.2 1.0
C3D A:HEM601 4.2 24.1 1.0
C3A A:HEM601 4.3 28.6 1.0
C2A A:HEM601 4.3 29.7 1.0
C2D A:HEM601 4.3 23.9 1.0
C3C A:HEM601 4.3 23.5 1.0
C3B A:HEM601 4.3 23.1 1.0
C2B A:HEM601 4.3 24.2 1.0
C2C A:HEM601 4.3 23.8 1.0
CG A:HIS388 4.4 20.8 1.0
OE1 A:GLN203 4.4 22.3 1.0
ND1 A:HIS388 4.5 21.3 1.0
CE1 A:HIS207 4.6 21.1 1.0
NE2 A:HIS207 4.6 23.3 1.0

Iron binding site 2 out of 2 in 1eqg

Go back to Iron Binding Sites List in 1eqg
Iron binding site 2 out of 2 in the The 2.6 Angstrom Model of Ovine Cox-1 Complexed with Ibuprofen


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of The 2.6 Angstrom Model of Ovine Cox-1 Complexed with Ibuprofen within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe601

b:24.1
occ:1.00
FE B:HEM601 0.0 24.1 1.0
NA B:HEM601 2.0 28.0 1.0
NB B:HEM601 2.0 24.4 1.0
ND B:HEM601 2.0 25.8 1.0
NC B:HEM601 2.0 25.4 1.0
NE2 B:HIS388 2.4 24.3 1.0
C4A B:HEM601 3.0 27.6 1.0
C1A B:HEM601 3.0 28.7 1.0
C4D B:HEM601 3.0 26.3 1.0
C1B B:HEM601 3.0 24.6 1.0
C4B B:HEM601 3.0 24.5 1.0
C1C B:HEM601 3.0 25.4 1.0
C1D B:HEM601 3.1 25.6 1.0
C4C B:HEM601 3.1 25.1 1.0
CD2 B:HIS388 3.1 23.2 1.0
CHB B:HEM601 3.4 26.0 1.0
CHA B:HEM601 3.4 27.7 1.0
CHC B:HEM601 3.4 25.1 1.0
CHD B:HEM601 3.4 25.3 1.0
CE1 B:HIS388 3.4 23.3 1.0
C3A B:HEM601 4.3 29.1 1.0
C2A B:HEM601 4.3 30.4 1.0
C3D B:HEM601 4.3 25.6 1.0
C3B B:HEM601 4.3 24.2 1.0
C2B B:HEM601 4.3 24.5 1.0
C2D B:HEM601 4.3 25.0 1.0
C3C B:HEM601 4.3 25.7 1.0
C2C B:HEM601 4.3 25.9 1.0
OE1 B:GLN203 4.3 23.1 1.0
CG B:HIS388 4.3 21.7 1.0
ND1 B:HIS388 4.5 22.4 1.0
CE1 B:HIS207 4.6 20.6 1.0
NE2 B:HIS207 4.6 20.8 1.0
CD B:GLN203 4.9 24.2 1.0

Reference:

B.S.Selinsky, K.Gupta, C.T.Sharkey, P.J.Loll. Structural Analysis of Nsaid Binding By Prostaglandin H2 Synthase: Time-Dependent and Time-Independent Inhibitors Elicit Identical Enzyme Conformations. Biochemistry V. 40 5172 2001.
ISSN: ISSN 0006-2960
PubMed: 11318639
DOI: 10.1021/BI010045S
Page generated: Sat Aug 3 04:35:59 2024

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