Iron in PDB 1etp: Crystal Structure of Cytochrome C4 From Pseudomonas Stutzeri

The structure of Crystal Structure of Cytochrome C4 From Pseudomonas Stutzeri, PDB code: 1etp was solved by A.Kadziola, S.Larsen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	8.00 / 2.20
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	49.490, 58.580, 63.510, 90.00, 96.96, 90.00
R / Rfree (%)	20.1 / 26.7

The binding sites of Iron atom in the Crystal Structure of Cytochrome C4 From Pseudomonas Stutzeri (pdb code 1etp). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the Crystal Structure of Cytochrome C4 From Pseudomonas Stutzeri, PDB code: 1etp:
Jump to Iron binding site number: 1; 2; 3; 4;

Iron binding site 1 out of 4 in the Crystal Structure of Cytochrome C4 From Pseudomonas Stutzeri


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Cytochrome C4 From Pseudomonas Stutzeri within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe199 b:19.2 occ:1.00 FE A:HEM199 0.0 19.2 1.0 NB A:HEM199 2.0 17.9 1.0 NE2 A:HIS18 2.0 9.1 1.0 ND A:HEM199 2.0 15.9 1.0 NC A:HEM199 2.1 18.3 1.0 NA A:HEM199 2.1 16.5 1.0 SD A:MET66 2.4 13.4 1.0 CE1 A:HIS18 3.0 9.8 1.0 C4B A:HEM199 3.0 18.9 1.0 C1C A:HEM199 3.0 19.3 1.0 C1D A:HEM199 3.1 16.5 1.0 C1B A:HEM199 3.1 15.5 1.0 C4D A:HEM199 3.1 14.0 1.0 C1A A:HEM199 3.1 15.1 1.0 C4C A:HEM199 3.1 18.9 1.0 C4A A:HEM199 3.1 12.3 1.0 CD2 A:HIS18 3.1 11.0 1.0 CHC A:HEM199 3.3 17.0 1.0 CHD A:HEM199 3.4 20.2 1.0 CHA A:HEM199 3.4 14.7 1.0 CHB A:HEM199 3.4 13.2 1.0 CG A:MET66 3.5 15.1 1.0 CE A:MET66 3.6 9.2 1.0 ND1 A:HIS18 4.2 9.6 1.0 CG A:HIS18 4.2 9.4 1.0 C3D A:HEM199 4.3 14.5 1.0 C2B A:HEM199 4.3 14.1 1.0 C2D A:HEM199 4.3 16.1 1.0 C2C A:HEM199 4.3 17.1 1.0 C3B A:HEM199 4.3 18.5 1.0 C2A A:HEM199 4.3 14.0 1.0 C3C A:HEM199 4.3 18.8 1.0 C3A A:HEM199 4.3 13.4 1.0 CB A:MET66 4.9 18.2 1.0

Iron binding site 2 out of 4 in the Crystal Structure of Cytochrome C4 From Pseudomonas Stutzeri


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of Cytochrome C4 From Pseudomonas Stutzeri within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe200 b:10.3 occ:1.00 FE A:HEM200 0.0 10.3 1.0 NE2 A:HIS123 1.9 4.6 1.0 NC A:HEM200 2.0 16.9 1.0 ND A:HEM200 2.0 15.0 1.0 NB A:HEM200 2.0 13.6 1.0 NA A:HEM200 2.0 12.2 1.0 SD A:MET167 2.3 14.6 1.0 CE1 A:HIS123 2.8 8.6 1.0 CD2 A:HIS123 3.0 6.9 1.0 C1C A:HEM200 3.0 18.9 1.0 C4C A:HEM200 3.0 16.6 1.0 C1D A:HEM200 3.0 14.8 1.0 C1B A:HEM200 3.1 11.2 1.0 C4A A:HEM200 3.1 10.1 1.0 C4B A:HEM200 3.1 15.3 1.0 C1A A:HEM200 3.1 8.8 1.0 C4D A:HEM200 3.1 14.1 1.0 CHD A:HEM200 3.4 13.6 1.0 CHC A:HEM200 3.4 16.5 1.0 CHB A:HEM200 3.4 8.4 1.0 CHA A:HEM200 3.5 10.6 1.0 CE A:MET167 3.5 9.1 1.0 CG A:MET167 3.5 8.1 1.0 ND1 A:HIS123 4.0 9.8 1.0 CG A:HIS123 4.1 5.1 1.0 C2D A:HEM200 4.2 14.5 1.0 C3C A:HEM200 4.3 19.3 1.0 C2C A:HEM200 4.3 16.9 1.0 C2B A:HEM200 4.3 7.3 1.0 C3D A:HEM200 4.3 13.0 1.0 C2A A:HEM200 4.3 7.9 1.0 C3A A:HEM200 4.3 9.1 1.0 C3B A:HEM200 4.3 13.0 1.0 CB A:MET167 4.9 12.6 1.0

Iron binding site 3 out of 4 in the Crystal Structure of Cytochrome C4 From Pseudomonas Stutzeri


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Crystal Structure of Cytochrome C4 From Pseudomonas Stutzeri within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe199 b:16.4 occ:1.00 FE B:HEM199 0.0 16.4 1.0 NE2 B:HIS18 2.0 10.3 1.0 NB B:HEM199 2.0 17.6 1.0 ND B:HEM199 2.0 17.4 1.0 NC B:HEM199 2.0 17.9 1.0 NA B:HEM199 2.1 17.9 1.0 SD B:MET66 2.2 15.3 1.0 CE1 B:HIS18 2.9 13.7 1.0 C4D B:HEM199 3.0 13.4 1.0 C4B B:HEM199 3.0 18.5 1.0 C1B B:HEM199 3.0 20.9 1.0 C1C B:HEM199 3.1 15.4 1.0 C1D B:HEM199 3.1 17.1 1.0 CD2 B:HIS18 3.1 11.9 1.0 C4A B:HEM199 3.1 20.4 1.0 C1A B:HEM199 3.1 18.0 1.0 C4C B:HEM199 3.1 17.0 1.0 CG B:MET66 3.3 16.2 1.0 CHC B:HEM199 3.4 17.9 1.0 CHA B:HEM199 3.4 15.5 1.0 CE B:MET66 3.4 11.9 1.0 CHB B:HEM199 3.4 17.4 1.0 CHD B:HEM199 3.4 14.9 1.0 ND1 B:HIS18 4.1 8.8 1.0 CG B:HIS18 4.2 10.9 1.0 C3D B:HEM199 4.2 14.9 1.0 C3B B:HEM199 4.3 17.1 1.0 C2B B:HEM199 4.3 17.8 1.0 C2D B:HEM199 4.3 14.6 1.0 C3A B:HEM199 4.3 21.4 1.0 C2C B:HEM199 4.3 17.3 1.0 C3C B:HEM199 4.3 15.2 1.0 C2A B:HEM199 4.3 17.7 1.0 CB B:MET66 4.7 17.8 1.0

Iron binding site 4 out of 4 in the Crystal Structure of Cytochrome C4 From Pseudomonas Stutzeri


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Crystal Structure of Cytochrome C4 From Pseudomonas Stutzeri within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe200 b:14.6 occ:1.00 FE B:HEM200 0.0 14.6 1.0 ND B:HEM200 2.0 13.9 1.0 NB B:HEM200 2.0 13.0 1.0 NE2 B:HIS123 2.0 12.9 1.0 NC B:HEM200 2.0 18.1 1.0 NA B:HEM200 2.1 17.8 1.0 SD B:MET167 2.3 13.2 1.0 CE1 B:HIS123 2.9 13.1 1.0 C4B B:HEM200 3.0 14.5 1.0 C4D B:HEM200 3.0 19.2 1.0 C1D B:HEM200 3.0 17.3 1.0 C4C B:HEM200 3.0 15.2 1.0 C1B B:HEM200 3.1 14.6 1.0 C1C B:HEM200 3.1 12.4 1.0 CD2 B:HIS123 3.1 13.0 1.0 C4A B:HEM200 3.1 14.6 1.0 C1A B:HEM200 3.2 13.2 1.0 CHD B:HEM200 3.4 15.8 1.0 CHC B:HEM200 3.4 8.1 1.0 CHA B:HEM200 3.5 15.6 1.0 CHB B:HEM200 3.5 16.1 1.0 CG B:MET167 3.5 8.9 1.0 CE B:MET167 3.5 10.4 1.0 ND1 B:HIS123 4.1 10.7 1.0 C3B B:HEM200 4.2 11.2 1.0 CG B:HIS123 4.2 10.4 1.0 C2D B:HEM200 4.2 14.6 1.0 C3D B:HEM200 4.2 17.4 1.0 C2B B:HEM200 4.3 10.9 1.0 C3C B:HEM200 4.3 16.9 1.0 C2C B:HEM200 4.3 13.9 1.0 C3A B:HEM200 4.4 14.8 1.0 C2A B:HEM200 4.4 14.7 1.0 CB B:MET167 4.9 18.5 1.0

A.Kadziola, S.Larsen. Crystal Structure of the Dihaem Cytochrome C4 From Pseudomonas Stutzeri Determined at 2.2A Resolution. Structure V. 5 203 1997.
ISSN: ISSN 0969-2126
PubMed: 9032080
DOI: 10.1016/S0969-2126(97)00179-2