Iron in PDB 1ew6: The Crystal Structure and Amino Acid Sequence of Dehaloperoxidase From Amphitrite Ornata Indicate Common Ancestry with Globins

The structure of The Crystal Structure and Amino Acid Sequence of Dehaloperoxidase From Amphitrite Ornata Indicate Common Ancestry with Globins, PDB code: 1ew6 was solved by L.Lebioda, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	8.00 / 1.78
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	68.500, 68.400, 61.000, 90.00, 90.00, 90.00
R / Rfree (%)	19.7 / 22.5

The binding sites of Iron atom in the The Crystal Structure and Amino Acid Sequence of Dehaloperoxidase From Amphitrite Ornata Indicate Common Ancestry with Globins (pdb code 1ew6). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the The Crystal Structure and Amino Acid Sequence of Dehaloperoxidase From Amphitrite Ornata Indicate Common Ancestry with Globins, PDB code: 1ew6:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the The Crystal Structure and Amino Acid Sequence of Dehaloperoxidase From Amphitrite Ornata Indicate Common Ancestry with Globins


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of The Crystal Structure and Amino Acid Sequence of Dehaloperoxidase From Amphitrite Ornata Indicate Common Ancestry with Globins within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe139 b:25.2 occ:1.00 FE A:HEM139 0.0 25.2 1.0 ND A:HEM139 2.0 25.4 1.0 NC A:HEM139 2.0 25.4 1.0 NB A:HEM139 2.0 24.5 1.0 NA A:HEM139 2.0 25.4 1.0 NE2 A:HIS89 2.3 30.7 1.0 C1D A:HEM139 3.0 25.8 1.0 C1C A:HEM139 3.1 24.2 1.0 C4D A:HEM139 3.1 26.2 1.0 C1B A:HEM139 3.1 24.3 1.0 C4C A:HEM139 3.1 25.5 1.0 C1A A:HEM139 3.1 25.9 1.0 C4A A:HEM139 3.1 25.2 1.0 C4B A:HEM139 3.1 24.0 1.0 O A:HOH197 3.3 33.5 1.0 CD2 A:HIS89 3.3 30.9 1.0 CE1 A:HIS89 3.3 30.9 1.0 CHD A:HEM139 3.4 25.3 1.0 CHA A:HEM139 3.4 25.6 1.0 CHB A:HEM139 3.4 24.9 1.0 CHC A:HEM139 3.4 23.0 1.0 C2D A:HEM139 4.3 26.9 1.0 C3D A:HEM139 4.3 28.2 1.0 C3A A:HEM139 4.3 26.2 1.0 C3C A:HEM139 4.3 24.9 1.0 C2A A:HEM139 4.3 26.9 1.0 C2B A:HEM139 4.3 23.7 1.0 C2C A:HEM139 4.3 24.6 1.0 C3B A:HEM139 4.3 23.4 1.0 ND1 A:HIS89 4.4 30.1 1.0 CG A:HIS89 4.4 31.0 1.0 CG2 A:VAL59 4.6 18.2 1.0 CG1 A:VAL59 4.9 17.6 1.0 CE A:MET86 4.9 33.9 1.0

Iron binding site 2 out of 2 in the The Crystal Structure and Amino Acid Sequence of Dehaloperoxidase From Amphitrite Ornata Indicate Common Ancestry with Globins


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of The Crystal Structure and Amino Acid Sequence of Dehaloperoxidase From Amphitrite Ornata Indicate Common Ancestry with Globins within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe139 b:24.5 occ:1.00 FE B:HEM139 0.0 24.5 1.0 ND B:HEM139 2.0 24.2 1.0 NC B:HEM139 2.0 23.7 1.0 NA B:HEM139 2.0 22.3 1.0 NB B:HEM139 2.0 21.6 1.0 NE2 B:HIS89 2.4 24.8 1.0 O B:HOH184 2.4 30.4 1.0 C4D B:HEM139 3.0 24.9 1.0 C1D B:HEM139 3.0 25.6 1.0 C1A B:HEM139 3.0 22.7 1.0 C1C B:HEM139 3.1 24.2 1.0 C1B B:HEM139 3.1 20.2 1.0 C4A B:HEM139 3.1 21.8 1.0 C4C B:HEM139 3.1 25.5 1.0 C4B B:HEM139 3.1 21.6 1.0 CE1 B:HIS89 3.2 25.1 1.0 CHA B:HEM139 3.4 23.9 1.0 CHD B:HEM139 3.4 25.2 1.0 CHB B:HEM139 3.4 20.1 1.0 CHC B:HEM139 3.4 23.7 1.0 CD2 B:HIS89 3.5 24.9 1.0 C2D B:HEM139 4.3 26.6 1.0 C3D B:HEM139 4.3 27.6 1.0 C3A B:HEM139 4.3 21.8 1.0 C2A B:HEM139 4.3 23.6 1.0 C2B B:HEM139 4.3 19.9 1.0 C3B B:HEM139 4.3 20.7 1.0 C2C B:HEM139 4.3 24.7 1.0 C3C B:HEM139 4.3 25.5 1.0 CG2 B:VAL59 4.3 17.3 1.0 ND1 B:HIS89 4.4 23.6 1.0 CG B:HIS89 4.5 26.5 1.0 CG1 B:VAL59 4.8 16.8 1.0 CE1 B:HIS55 4.9 30.2 0.4

M.W.Lacount, E.Zhang, Y.P.Chen, K.Han, M.M.Whitton, D.E.Lincoln, S.A.Woodin, L.Lebioda. The Crystal Structure and Amino Acid Sequence of Dehaloperoxidase From Amphitrite Ornata Indicate Common Ancestry with Globins. J.Biol.Chem. V. 275 18712 2000.
ISSN: ISSN 0021-9258
PubMed: 10751397
DOI: 10.1074/JBC.M001194200